Gene Ping_3144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3144 
Symbol 
ID4626155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3870607 
End bp3871317 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content34% 
IMG OID639798248 
Productriboflavin synthase subunit alpha 
Protein accessionYP_944431 
Protein GI161986628 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0307] Riboflavin synthase alpha chain 
TIGRFAM ID[TIGR00187] riboflavin synthase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.212447 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTACAG GAATAGTTCA GTCTATAGCG AATATTGCTG ACGTTAGTGA TGAAAATGGT 
ATTAGAACGT TTATTATCGA TTTCAAGGTT GGGTTTTGTA ATAATTTAGA AATTGGGGCG
AGTGTCGCTG TTGATGGTGT TTGTTTAACA GTAACAGAAA TAATTTCAGA GGTTAGAGTT
AAATTTGATA TTATTTTACA AAGTCTTTTG ATCACCACTT TAAGTGAGTA TGAAAACGAT
TCATATATAA ACGTCGAAAG AGCTGCAAAG GATGGAGCTG AAATTGGTGG GCATCCATTA
TCTGGTCATG TTGATTTTAA GACGCCAATT GAAAAAATCA TTCAGATTGA AGATAATTAT
TGTATTCGTT TAAGTTTATC GAATGAGTGG AGTCGTTACA TTTTCCCTAA GGGGTACATT
GCACTAAATG GTGCAAGTTT GACTGTTTCT CAAGTAAATA AGCAAGAGGG CTGGTTTGAA
GTTTGGTTAA TTCCAGAAAC TCGTAGAATG ACTGTATTCG AAGACAAGAT TGTCGGAGAT
AATATCAATG TTGAAATTGA GCGTGGGACT CAGGTTATAG TAGATACTGT AAGAGATACA
CTTCATGAAA GTTTAGGCCC TTTACTTCCA TTGTTCGAAA AGTTACTAAC AGAACAAGGT
ATTGACGTTA ATTCATTAGG TCATAGCCCT GAATTACTTA TAAAAAAATA G
 
Protein sequence
MFTGIVQSIA NIADVSDENG IRTFIIDFKV GFCNNLEIGA SVAVDGVCLT VTEIISEVRV 
KFDIILQSLL ITTLSEYEND SYINVERAAK DGAEIGGHPL SGHVDFKTPI EKIIQIEDNY
CIRLSLSNEW SRYIFPKGYI ALNGASLTVS QVNKQEGWFE VWLIPETRRM TVFEDKIVGD
NINVEIERGT QVIVDTVRDT LHESLGPLLP LFEKLLTEQG IDVNSLGHSP ELLIKK