Gene Ping_3114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3114 
Symbol 
ID4625906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3833416 
End bp3834453 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content35% 
IMG OID639798227 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_944410 
Protein GI119946730 
COG category[R] General function prediction only 
COG ID[COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCAAC TTAAAATTCA ATTCATAAAT GCAGGCGTAG GTGATTGTAC TCTCATCACT 
GATCTAGTCT CCAATAAGAA AATATTAATA GACTCAGGTC CGAGTAAGGG CGTTGGCAGA
TTGACGGTTA CGAGTGTACT AACGCGTATC TTAGGTGGTA ATAAAGATAT TGATTTAGCT
ATACTTACTC ACAACGATGA CGATCACATT GGTGGGTTTA CAGGTTTGAT CACCAATAAT
ATTGTTAAAA TTAACAAGAT TATTTTTAAC ACGGTAGCTG AACTAGAAGA CGATCAATTT
GTAGATTCTG GAAAAGCATC ATATCGACAA GACTTGAACT TATATAAAAC CGTCAAGGAT
ACAAATATTG ATATAGAGAG CCTTGTAGTT CATGAGGGTA GTTTAAACAC TATAGAACTT
GGGGATATTA CTCTTCGGTT TATTTCACCA AATATATCTA AAATGAGTAA GCTAAAAAGC
TGGGCTATTA GAGAAGAGAA GGTGGCAGTA AAAAAAGAAG AAGAACGTTT GGCTAAAAGT
AAAAAGGCAT CTAAAAATGT CAATTATACT TGTCTTGACG ACGCTTTAGA CGCTATCAAT
TTAGAAGATA CATTCGAGCC AGATACTAGA GAGCCTAACG GTTCCTCTTT TGCTTTCATA
TTAGAATATG GCGATAATCG TTTATTATTT CTTGGTGATT GCCATATGGA TATTGTGGAA
GCCTATCTAG CGGATCAGGA TAAACCACAA ATTTTTGACC TTGTTAAACT GTCACATCAC
TCTAGCGAAC ATAATAATAG TCAGGAATTT TTTAACCAAA TTGATTGTGA GAATTTTGTT
GTTTGCAGCG ATGGCTATAA TACTCATGGT CACCCTTCAA TGAAAACTAT CGCCAGACTT
ACCAAAAGAT TTCCTGAGTC ATTTATACAC TTTACCTCGG AGAGCGACAG GATCAAAACT
TTTACACAAT CATTTGAAGA CAGATGCCAT TTCCCATTGG ATAATGCCTT AGAGTTCACA
TATGACCTAT CAAAATAA
 
Protein sequence
MSQLKIQFIN AGVGDCTLIT DLVSNKKILI DSGPSKGVGR LTVTSVLTRI LGGNKDIDLA 
ILTHNDDDHI GGFTGLITNN IVKINKIIFN TVAELEDDQF VDSGKASYRQ DLNLYKTVKD
TNIDIESLVV HEGSLNTIEL GDITLRFISP NISKMSKLKS WAIREEKVAV KKEEERLAKS
KKASKNVNYT CLDDALDAIN LEDTFEPDTR EPNGSSFAFI LEYGDNRLLF LGDCHMDIVE
AYLADQDKPQ IFDLVKLSHH SSEHNNSQEF FNQIDCENFV VCSDGYNTHG HPSMKTIARL
TKRFPESFIH FTSESDRIKT FTQSFEDRCH FPLDNALEFT YDLSK