Gene Ping_3108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3108 
Symbol 
ID4624269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3821581 
End bp3823788 
Gene Length2208 bp 
Protein Length735 aa 
Translation table11 
GC content40% 
IMG OID639798221 
Producttransposon Tn7 transposition protein B 
Protein accessionYP_944404 
Protein GI119946724 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.101373 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCGCTTA ATCCTAAACG CTCAGCAGAG CTTAAGTTAA ATTCTGGATT TGGTCCCTCT 
GAAGAGGCTT TATTACCCGT TTATATCGGA GAATATGAAA TCTCTGAAGA CTACCTTATT
GTTTTTGTTG ATCTTTCAAT TAATGTGTTG TGCGCCATCA ATCTGGACTC TACTGCTCGA
TTTCCGATAA AACTGAATTA TAAGGAGGTG TTAGCGCAGT TAGAAACTGA GCAGATTCTT
TTATTTGAGA TGGATTGGCC CAAAGAAGCG TTGCAGGACA TTGATAGTCA ACCAGAGTGG
AGGCGGGAAA AATGTATCGC GCGCTATGCA CTGATTGGAC CGTTAGTAGA TGACTTAGAA
AATGTACTAA GGAATGATTA TGGTCAGGGG TGTTTTCAAA GCATTATTAA AGAAACAGGT
AAGAGTAAGC AGACCGTCTA TGATTGCTTT TACGCATTTT TGCGCATGGG AAGACGTAAA
TCGGGTCTTT CTTTTCCGAT CGGAAAAAAT TCAAATCACA TTCCCAAGCA AAGAAAGCAG
TATGTTAAGC CAGGTCGTCC AAGTAGAGGA ATCGCCAGAG GTAAGTTATT AAATGAAAGA
GATTTCGATA TTTTTAAAAA AGGTTTGCGC TGGTACGGAC AGAGGAATGG CCCATCTATA
CTCTACGTTT ATAACAAGAT TTTGCGAAAA CATTACCATA AATCACGTGT AAAGAATGAC
TTTCTGACAG CAGAAAAAAC AGGGGAGCGC TTTAAAGTCG TGCTGCTTCC TCCTGATGAA
ATACCGTCTT ATAACCAGTT TTATTACTGG TTGGTAAAAC AGTTTGGCGG CAACCTACCT
AAACGAGACA AAAGTCGCCA AAACGCCATT GAAAATAAAA AAGACAACGC GGGCAGAACG
GGAAATGCAT ATATGCATGT TATCGGTCCA GGGCAAGTTT TCGAACTGGA TGAAACCCCT
TTTACAGAGG AACTGGTATC GGTTTTTGAC CCTTCTCGGT CAACAAAAAT CGGCAAAGGG
ACACTCTATT TCATCATCGA TGTGTTCACA AAGCTAATTG TCGGCCTGTT TATTACCACC
GAAAATCCAT CCTATAACAC GGTAAAGCAA GCCATTTTTA ATGCAGGCCG AGACAAGCAA
GGATGGTTTG ATGAACTGGG GTTTAACTTT AATGCTAAAT ACTGGCCTCA GTCTGGGGTA
CCAACAATTA TTTTTGTGGA TAAAGCGGAA TTTCATAATA AAGTTTCCGA GGGACCTATT
GCAGACCTGC CTGTGGTGTT GAAGTTTTCC CGTTCGGGAC GCGGTGATGA CAAACCAAAT
ATTGAGCAGT TATTTCATAT TTTTCTACGT TATTTTATGG GAGTAAGTCA GGGGAATCAA
ACAAAGTCTC AGCAAGATAT TGCACGGCAA GTTGCACGTA AAAATGCGTG TTTAACTATT
CCTGAACTTT ATCAAATTGC GATTGTTTAC GTGCTTTATC ACAACAATAA TCGAAAATTA
CCAAAATATC CTTTAGAGCG TGAAATGGTG CGTGACAAGG TACCTGCTAT TCCAGTCAAA
CTGTGGGAAT GGGGGATGAA AAATAGACCC GGTTATTTGA TTAATGTCCC CGAGGATGAG
CTTTATATGA AATTACTCGC CAAGGGTGAA ATGACTGTTC ATAAGTATGG TTTGTTCTTG
AAGGATAAGG GACTTTTGTA TAACTGTGAC TGGACCTTAG CCTCGGGTAT ACAGGAACGT
AAGCTTAAAA ATCAAAGGTG TCTAACGCTT GCATGTCGTT ATAACGCGGA GCTTGTTGAT
ATTATCTTAA TTTGTACCGA TGACGGCCTT AAGCTCGCCA CGCTGGATCA CAAAGATAAC
CGTTTTGCAG GGCTCTCTTT CGCCCAAGTC GCACAACAAA AAGATAAAGA ATTCAAAGAA
GATGCGTTAG CTGCGGAGGA AGAGATTCAA TATCTACTCG GAGTTGATGA ATTTATAGAG
CAGAAACTGT TACAAGCAAA TAAAGAAAAA GTGTCGGGTT CTGTTCCTAA TATCTCCAAG
ATTAAAGACA ACCGAAAATT TGAGGCATTG CTTAATCGAC ACCAAGATAT GCACCGTTTT
CTGCAAGTCA CACAACAGCA GGTTTTACCC CAGATAAAAA ATCCCCCTTA TGATCAAGAT
GTTTCTGAAC ACAAGGGATA CGCAGAATTT GATGAGGATG ATGAATAA
 
Protein sequence
MSLNPKRSAE LKLNSGFGPS EEALLPVYIG EYEISEDYLI VFVDLSINVL CAINLDSTAR 
FPIKLNYKEV LAQLETEQIL LFEMDWPKEA LQDIDSQPEW RREKCIARYA LIGPLVDDLE
NVLRNDYGQG CFQSIIKETG KSKQTVYDCF YAFLRMGRRK SGLSFPIGKN SNHIPKQRKQ
YVKPGRPSRG IARGKLLNER DFDIFKKGLR WYGQRNGPSI LYVYNKILRK HYHKSRVKND
FLTAEKTGER FKVVLLPPDE IPSYNQFYYW LVKQFGGNLP KRDKSRQNAI ENKKDNAGRT
GNAYMHVIGP GQVFELDETP FTEELVSVFD PSRSTKIGKG TLYFIIDVFT KLIVGLFITT
ENPSYNTVKQ AIFNAGRDKQ GWFDELGFNF NAKYWPQSGV PTIIFVDKAE FHNKVSEGPI
ADLPVVLKFS RSGRGDDKPN IEQLFHIFLR YFMGVSQGNQ TKSQQDIARQ VARKNACLTI
PELYQIAIVY VLYHNNNRKL PKYPLEREMV RDKVPAIPVK LWEWGMKNRP GYLINVPEDE
LYMKLLAKGE MTVHKYGLFL KDKGLLYNCD WTLASGIQER KLKNQRCLTL ACRYNAELVD
IILICTDDGL KLATLDHKDN RFAGLSFAQV AQQKDKEFKE DALAAEEEIQ YLLGVDEFIE
QKLLQANKEK VSGSVPNISK IKDNRKFEAL LNRHQDMHRF LQVTQQQVLP QIKNPPYDQD
VSEHKGYAEF DEDDE