Gene Ping_3073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3073 
Symbol 
ID4624012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3773023 
End bp3773370 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content47% 
IMG OID639798188 
Producttranscriptional regulator, TraR/DksA family protein 
Protein accessionYP_944371 
Protein GI119946691 
COG category[T] Signal transduction mechanisms 
COG ID[COG1734] DnaK suppressor protein 
TIGRFAM ID[TIGR02420] RNA polymerase-binding protein DksA 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0240851 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCAG ATAAAATAAT TCAGTTTCGC AAGCAGTTGA TAGCCCTTAA GGAAGATCTT 
ATTAGTGTGC TTGCCAGCAC TGCAAATGAA ATCAAGCCAG TGGTTCTGGA TCAGGCCGCT
GTTGGTCGCG TATCGAGGGT CGATGCCATG CAGATCCAGC AAATGGCACT TGAATCTTCG
CGCCGTCGCG AACGTCGATT AATCAGTGTG GAGCAGGCGC TAAAGCGATT GGAGAAACAG
ATATATGGAA TCTGTGTCGA CTGTGACGAA GACATCAATG TTCACCGTTT GGAAATCGAT
CCAACGGCCA TTCGCTGTAT CAAATGTGCA CAAGTACTTT CGCTGTGA
 
Protein sequence
MQPDKIIQFR KQLIALKEDL ISVLASTANE IKPVVLDQAA VGRVSRVDAM QIQQMALESS 
RRRERRLISV EQALKRLEKQ IYGICVDCDE DINVHRLEID PTAIRCIKCA QVLSL