| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_3070 |
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| Symbol | |
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| ID | 4626100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 3768928 |
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| End bp | 3770988 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 639798185 |
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| Product | glycogen debranching enzyme GlgX |
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| Protein accession | YP_944368 |
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| Protein GI | 119946688 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0162429 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTCAG CTTCGAATGG TAAACCAGAT AAGTTAGGCG TGACCTATAG CAGCAAAGGT
GCCAATTTTT GTATTTATGC GCGGCTGGCA GAAAGTGTCG AACTGCTTTT TTTTGAAGAT
AAAGATGCCG ATGCAGCGAG CAATATATTT AAATTTTCAA CTAATGATAA TCGTACCGCT
TATTATTGGC ATATTTTTAT TGAAGATGTA AAACCGGGAC AACTCTATGG CTTTCGTGTC
AATGGACCTT ATCGCCCCTA TCAAGGAACG GCTTTTTCCC CAAAGAAAGT GTTATTAGAC
CCCTATGGAT TATTGGTTGA ACGGGGTGAT CACTTTTCCC GTGAGGCAGC ACTTGGCAGC
GGCTCCAATA TTGATACCTG TTTAAAAAGT GTGGTGGTTG ATATAGATGA TTATGATTGG
CAGGAAGATC AACATCCTCG GCACTCTTTT TATAAAACAG TTATTTATGA AATGCATGTG
GGCGGTTTTA CTCGCCATCA AAGTGCTAAT ATTGCAAAAA AAAAACGCGG TACTTATGCG
GGCTTAATTG AAAAGATCCC CTATTTAAAA GAACTGGGGG TAACCGCCGT TGAACTAATG
CCGATTCATC AGTTCGATCC GGGTGAACAT CACGCCGGAT TGGCTAACTA TTGGGGATAT
AGCCCGTTAT CCTTTTTCGC AGTGCATCGC GAATACAGCT CAGACAGATC CAGGCTGGGC
CCCGTTAATG AATTTAGAGA TATGGTAAAA GCCCTGCATG CGGCTGATAT TGAAGTTATT
TTGGATGTGG TTTATAACCA TAGCGCAGAG GGTGGGGAAG GTGGCCCGTC TTTTTCGTTG
CGTGGTTTTG ATAACAATGA TTATTACATC TTATCCAAAG ATAGACAGCA TTATATGAAT
TTTAGTGGTT GTGGTAATAC CCTTAACGGT ACACATTCCG TGGTTAGACG CATGATTATT
GACAGTTTGC ACTTTTGGGT AGACAAAATG CATATAGATG GATTTCGTTT TGATTTGGCC
TCTATTCTAT CCCGTGATGA GCTTGGTGCG CCTATGCTCA GCCCGCCGAC GTTATTCAGT
ATTGATACTG ATCCGATTTT GTCCTCAATT AAGCTGATAG CAGAAGCATG GGATGCAGGG
GGATTATATC AAGTGGGTAG TCTGGCAGGG CAGCGTTGGC GAGAATGGAA CGGTCATTTT
AGAGATGATG TACGGCGTTT TGTGCGTGGC GATCAGGGTA TGGTAAGTCA GTTTGCCAAC
CGTTTGATTG GCAGTCCGGA TATTTACGGT GAACATCACT TTGAACCGGA AAAATCGGTA
AACTTTATTA CCTGCCATGA CGGCTTTACG CTTAATGATC TGGTCAGTTA TAATAACAAA
CATAATTTGC CCAATGGTGA AAATAATCTC GATGGATGTG ATTATAATTT CAGCTGGAAT
CATGGGGTTG AAGGTGAAAC GAATGATCCT AAAATCCTTC AGCTGCGCAA TAAGCAAATC
AAAAACATGC TGACGATAAC TTTGCTCTCT TTAGGTACGC CGATGATTTT AATGGGTGAT
GAAATAGGGC ATTCGCAAAA AGGCAATAAT AATGGCTATT GTCAGGATAA TCCGGCATTT
TGGTTTGATT GGAGTCAGAT TAAAAAGAAC AGGGCGCTTT TTGACTTTAC TAAGGGTTTA
ATTAAACAGC GTACCGCTAT CTATCTCAAT CCCAGTTTCC GCTATTCTTT GCATGATATT
ATTCTACGGT CAGACATTCA TTGGCATGGT GTGAAACTCA ATCAACCTGA TTGGAGTGAG
TGTTCTCATA GCATTGCCAT GGAAAGTACA CACCCTCACT CAGGGGTTGT CTCTTATGTT
ATTTTTAATG CTTTTTGGGA AGTACTTAAC TTTGAATTAC CAATATCTGC ATGCGGGAAA
TGGTTGCGAA TCGTTGATAC TTCCTTAGTG GATGGTAACG ATATTTATAA GAGTGGCGAT
AAAAAATACT GGTTTAACGA TCAATACCTT GTTGCACCAC GATCCGTGGT GATTTTGATT
GGAGAAACAC CCGATGATTA A
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| Protein sequence | MFSASNGKPD KLGVTYSSKG ANFCIYARLA ESVELLFFED KDADAASNIF KFSTNDNRTA
YYWHIFIEDV KPGQLYGFRV NGPYRPYQGT AFSPKKVLLD PYGLLVERGD HFSREAALGS
GSNIDTCLKS VVVDIDDYDW QEDQHPRHSF YKTVIYEMHV GGFTRHQSAN IAKKKRGTYA
GLIEKIPYLK ELGVTAVELM PIHQFDPGEH HAGLANYWGY SPLSFFAVHR EYSSDRSRLG
PVNEFRDMVK ALHAADIEVI LDVVYNHSAE GGEGGPSFSL RGFDNNDYYI LSKDRQHYMN
FSGCGNTLNG THSVVRRMII DSLHFWVDKM HIDGFRFDLA SILSRDELGA PMLSPPTLFS
IDTDPILSSI KLIAEAWDAG GLYQVGSLAG QRWREWNGHF RDDVRRFVRG DQGMVSQFAN
RLIGSPDIYG EHHFEPEKSV NFITCHDGFT LNDLVSYNNK HNLPNGENNL DGCDYNFSWN
HGVEGETNDP KILQLRNKQI KNMLTITLLS LGTPMILMGD EIGHSQKGNN NGYCQDNPAF
WFDWSQIKKN RALFDFTKGL IKQRTAIYLN PSFRYSLHDI ILRSDIHWHG VKLNQPDWSE
CSHSIAMEST HPHSGVVSYV IFNAFWEVLN FELPISACGK WLRIVDTSLV DGNDIYKSGD
KKYWFNDQYL VAPRSVVILI GETPDD
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