| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_3051 |
|---|
| Symbol | |
|---|
| ID | 4626035 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 3749116 |
|---|
| End bp | 3749973 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 639798167 |
|---|
| Product | MscS mechanosensitive ion channel |
|---|
| Protein accession | YP_944350 |
|---|
| Protein GI | 119946670 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0668] Small-conductance mechanosensitive channel |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0787633 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGAGA TCGGGCATTA CCTCTCTGAT GTTTTTAATA TCGAATTTAT CGCCAAACTG
CTGCGCGCAG CTTTATTATT AATATTAGGC TTTATCTTTG CCAAATTGCT CAGTTATTAC
AGCACACGCT TTAGCGAAAA AGTATTTACC CTGCAGACCG CCGGTCTTAT TAAGCGAATC
ATCTATCACC TGATTTTTAT ACTCTTTATC TTTTCAGCAA TGTTAGAGAT GGGCTTTAAT
CTTAACGTTC TGCTGGGTGC TGCCAGCGTA TTAACCGTGG CGGTGGGCTT TGCTTCACAA
ACCTCAGCAT CCAATTTTAT TAGCGGTATT TTCCTGATGG CTGAACGCTC ATTTAGCGTC
GGGGATGTGA TTCGTGTGGG CACCACAGTA GGAGAAGTCT TATCCATTGA TCTGCTATCG
GTTAAGTTGC GTACCTTTGA TAACTTATTT GTCCGCTTGC CTAATGAAAC ATTAATTAAA
TCCGAGGTGA CCACCCTCAC TAAATTCCCG ATTAGGCGGC TGGATCTAAA GATTGGCATC
GCCTATAAAG AAAATATTGA TAAAGTGAAA ACTATTTTAC AGCAGGTCGC ATCGGATAAT
CCGTTATCTT TGGAGGAGCC AAAACCTTTA TATATTTTTC AAGGATTTGA AGATTCATGC
TTAAGTCTGC AGTTTTCAGT CTGGGCAAAG CGGGAAAATT TTTTGGAATT AAAAAATTCG
ATTTACGAGC AGATAAAAAT CGCTTTTGAT AAACAGGAAA TCGAAATACC TTTCCCGCAT
ATTAGTCTCT ACGCAGGCAG TGTTACCGAG CCTTTTCCCA TTAAAATAAC CAGAGAAAAA
AAATCATCAA AGCAGTGA
|
|---|
| Protein sequence | MNEIGHYLSD VFNIEFIAKL LRAALLLILG FIFAKLLSYY STRFSEKVFT LQTAGLIKRI
IYHLIFILFI FSAMLEMGFN LNVLLGAASV LTVAVGFASQ TSASNFISGI FLMAERSFSV
GDVIRVGTTV GEVLSIDLLS VKLRTFDNLF VRLPNETLIK SEVTTLTKFP IRRLDLKIGI
AYKENIDKVK TILQQVASDN PLSLEEPKPL YIFQGFEDSC LSLQFSVWAK RENFLELKNS
IYEQIKIAFD KQEIEIPFPH ISLYAGSVTE PFPIKITREK KSSKQ
|
|---|
| |