Gene Ping_3035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3035 
SymbolglgA 
ID4625121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3733714 
End bp3735180 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content41% 
IMG OID639798153 
Productglycogen synthase 
Protein accessionYP_944336 
Protein GI119946656 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0297] Glycogen synthase 
TIGRFAM ID[TIGR02095] glycogen/starch synthases, ADP-glucose type 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACAAAA AATTAAAAAT TCTTTTTATT TCATCAGAAG TTGAAGGATT CTCAAAAACG 
GGTGGATTAG CCGATGTTGC CAAGTCATTA CCCATAGAAT TACGTAACCT GGGCCACGAA
GTTAAAATTA TCACGCCATT TTATCGTGCT ATTAATCATA GTGAAGATGC TCAGCAGCTT
TTAAATTTAG TACTCAAAAC AGACTATTCT CGGCCCGATA TTCATTTTCA AGTGCATCAG
CTGGATTTAG ATGGAATTCC TGTTTTAACC ATTGATAATG CGCATTATTT TGATCGTGAC
GGATTATACG GGGAAGATAA TCGTGCTTAT CAAGATAATG GTGAACGTTT TGCATTTTTC
TCTTGGGCAG CCATAAAAGC CTGTGATGCG ATGGATTTCA CCCCAGATAT TATCCACTGT
AATGATTGGC ACACCGGATT GGTTCCCTAC CTTCTGAAAA CCCGCTATGC AGATAACAGC
CGTTTTGCCG ACACCAAAAC CGTATTCACC ACCCATAATG CCTGTTATCA GGGGATTTTT
GACAAATCTC AATTAAATAT TATTCCCGAA GTGGGTTCGT GCATGGATGA TCGTGTTCTG
GATAATTACA GCTATATCAA CTACCTTAAA GTGGGATTAA CTTACAGTGA TAAAATCAAC
ACCGTCAGTC CCAACTATGC AAGCGAGCTA CTTACACCAC TGGGTTCCCA TGGTATGTCA
GAGCTTTTTA TCAGGCGTAT TCATGACTTT GAAGGCATTT TAAATGGCTG TGATTACAAC
GACTGGAACC CTGAAACGGA TCCCTATATT CCGGTAAATT TCAGCGCGAC GGATATCAGC
GGTAAAGAAA TTTGTAAAAA TACCCTGCAA AAAGAGGTTG GCCTGCCAAG CAGCGATAAT
CCTTTTTTTG GCATGGTCTG TCGCATAACA GATCAGAAAG GCTTTGGTCT GATTCTGCCA
ATGTTAGAGC GTTTTCTTAA GCATAATGTG CAAGTTGTTA TCGTTGGATC TGGCGAGCCT
TCGATCACCG GACAACTCAA CGCCATTGCG GCGCACTTTC CAAATAAGTT TAAATTTATA
AATATTTACA GTGATAAACT GGCACATATG GTTGAAGCGG GCGCAGACTT TTTTTTAATG
CCATCAATCT TTGAACCATG CGGTTTAAAC CAATTGTATA GTTTAGCTTA CGGTACACTG
CCCATTGTCC GGGCTGTAGG TGGATTAAAA GATACGGTAT TGGATTATGA TCAGGATCCG
GACAGTGCCA ATGGTTTTGT GTTCTTTGAT CCGAATCCAA ATCAACTGCT TCATATACTG
CGGCGGGCAT TATTACTCTA TATTGAGCAT CCGGAAGAGA TGTTACGCTT GAAAACAAAA
GCGATGCAAT CCCACTTCTA CTGGTCTGAT GCCGCTAAAC ATTATGAACA TTTATATTAC
AGTGCGCTGA AAAAGCTACA TTTCTGA
 
Protein sequence
MDKKLKILFI SSEVEGFSKT GGLADVAKSL PIELRNLGHE VKIITPFYRA INHSEDAQQL 
LNLVLKTDYS RPDIHFQVHQ LDLDGIPVLT IDNAHYFDRD GLYGEDNRAY QDNGERFAFF
SWAAIKACDA MDFTPDIIHC NDWHTGLVPY LLKTRYADNS RFADTKTVFT THNACYQGIF
DKSQLNIIPE VGSCMDDRVL DNYSYINYLK VGLTYSDKIN TVSPNYASEL LTPLGSHGMS
ELFIRRIHDF EGILNGCDYN DWNPETDPYI PVNFSATDIS GKEICKNTLQ KEVGLPSSDN
PFFGMVCRIT DQKGFGLILP MLERFLKHNV QVVIVGSGEP SITGQLNAIA AHFPNKFKFI
NIYSDKLAHM VEAGADFFLM PSIFEPCGLN QLYSLAYGTL PIVRAVGGLK DTVLDYDQDP
DSANGFVFFD PNPNQLLHIL RRALLLYIEH PEEMLRLKTK AMQSHFYWSD AAKHYEHLYY
SALKKLHF