| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2847 |
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| Symbol | |
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| ID | 4625872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 3502434 |
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| End bp | 3507533 |
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| Gene Length | 5100 bp |
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| Protein Length | 1699 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639797969 |
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| Product | cadherin domain-containing protein |
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| Protein accession | YP_944152 |
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| Protein GI | 119946472 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCAT TAATTTTACG TATTGCGTTA CCAGATGGTA AGCAACAAAC GCTTGCTTTA
CTTGAATTAC AAACCCTGAC TGCATCAATG GGTGCTGTTT ATACCTTGGT TGAACAGGAT
ACTCAGCAAG CACCAGAAGC GTTGGTCTTA AAACGTAAAG GTGATGATTT AGAGATTGAA
GTTGAAGGTG ATCTCGTTGC GCATATTGAC GGTTTTTATA GTGCAGAGAT GAACGCAACT
TTCTCGGCCG ATGGCACTGT CACCCCTAGT GAGGGCATGG CGGTGAGCAG TTCAGATCTG
CTGGAGAGCG TTTCAGTAAG TGATAGTGGC GAAGCCGCCG TTGTCTGGAC AGCACAAGAG
AGTGCTGATT TTTTAGGTTT GCCGCCTTCA GCATGGGCCG GTGGCCTGCT TGCCGGTGCT
GCTGGAGCAA TTGCACTGGT TAATAATACG GACAGTTACG AGGTTACCTT AAATCCCGCC
GCCGGGCCCT TTATAGCAGT TGCTACTGTA GAATTATATG ATAAAAATGG CAACCTGCTG
GGAAGCAAAA CCCATGATTT TAGCACTGGG CCGGTGAGTT TTACTATTGA CAATGGTTAT
CAGGGACCAC TATTAGCTAA GTTGATTGAT GCTAATGGCG ATGGTGGCGA CTATTTGGAT
GAAACGACCG GGCAGCTTGT CAGCTTGGGC AGTTCACTGC GCGCCATGAC GGTGACGGAC
GGCACAGGTA ATGTCAGCAT GAGTATTACC CCTTTGAGTG AGCTGGCAGT ACGTCAGGCG
GGCGTCCTAG ATGACAATAA AGTCACTGAA GAAAATGTAA CAGAGAATGA GCAGGTTGCT
AAATTATTTG GTGTTGAAGA TGTTTTAGCG CTGGTAACAA CGGTACTGGA CGAAAATTAT
AACAGTATTG ATGGCACGAG CAATGCAGAG CAATACGGTA ATGTGTTGGC GTTGTTATCG
GGCATCGACA GTACCACCGG TAGTATCGAT GCCACTCTTG CGCAATTAAC AGCATTTATG
GTTAGGCAGG AAGATGGCAC CTTGGCGTTA ACTCAGACTG GTGTTGAGCT GTTGCAGGCT
GGGGTGGTTA AATTTGAAGC CAGTGATAAT GCTGATTTGG CCGATTTGGC CGATGCGCTT
ATTGTGGGGC CAGTGATTGC GGCAGCAAAA AACGGTATTA ATAAAGCTGA GGCTGATCAG
GGTGTCAGTG TGCAGGTTGC AAATGTTACT GCCGGGGATA CGGTCAACAT TCACTGGGGA
GATCAAAATC AGAGTGTTGT GGTCAGCGCT GACAATCTGC TGGAGGGTGT TGCCACTATT
TTGGTGCCAA AAGCCAAAGT TGATGTAGCG GGTGAAGGCA GTATTGGGAT CACATCGCAA
ATAAATACCC AACAAGTAAG CCCGGCAACA ATCATCAGCG TGGATTTCAC CGGGCCTGTG
ATCAGCAGCG TAAACTTCAG TGATACAGCC CTTAAAGTGG GTGAAACCAG CTTAGTCACT
ATTACTTTTA ATGAAGCGGT AAGCGGCTTT GATATTAATG ATATCACCGT TGAAAACGCC
ATTTTGAGTG AGTTGAGTGT CACGGATAAC CCGCGGATTT ACACTGCGAT CTTAACGCCT
GATGCAGGTG TTGATGATGC CACTAACCTG ATTTCGCTAG GTAGCGATTA TACTAATATT
GAGGGTAATA CGGGTTATGT CAGTAACAGC AGTAATTATG CCATTGACAC CACTGTACCG
ACAGTAACGA TCACGGATAA CATTAGCGAA ACGGCTATTG ACGATGTGAC TTATACCTTT
ACCTTCAGTG AGAATGTGCG CCTCTTTGGT GTTGAGGATG TCACTGTAAC CGGGGGCACA
AAAGGGGCAT TTACTGCCGT TTCAGGCAGC CAATATACTT TGGTCGTTAC CCCAAGTGCA
GAGAGTGTTG TGGATATCAC CGTTAATGTG GCAGCTGATA TTGCGCAGGA TGCCGCGGGC
AATAATAACC TTGTTGCATC TGAATCCGTG CAAGCCGTGG ATACTGTTAT TCCGACGGTA
ATTATTAGTG ATGATACAGC CGCAACGGCC ACGGGCGATG TCACCTATAC CTTTACCTTT
AGTGAGAATG TGACCGGCTT TGGTGTTGAG GATGTCACTG TAACCGGGGG CACAAAAGGG
GCATTTACTG CCATTTCAGG CAGCCAATAT ACTTTGATCG TTACCCCAAG TGCAGAGAGT
GTTGTGGATA TCACCGTTAA TGTAGCAGCT GATATTGCGC AGGATGCCGC GGGCAATAAT
AACCTTGTTG CATCTGAATC CGTGCAAGCC GTGGATACTG TTATTCCGAC GGTAATTATT
AGTGATGATA CGACCGCAAC GGCGACGGGT GAAGTGATTT ATACCTTTAC TTTTAACGAA
GATATAGATT TTAGTGCTGC TGATGTTACC TTGACGGGTG GCACAAAAGG CGCGTTTATT
GCCGTTTCAG GCAGCCAATA TACTTTGGTC GTTACCCCAA GTGCAGAGAG TGTTGCGGAT
ATCACCGTTA ATGTGGCAGC TGATATTGCG CAGGATGCCG CGGGCAATAA TAACCTTGTT
GCATCTGAAT CCGTGCAAGC CGTGGATACT GTTATTCCGA CGGTAATTAT TAGTGATGAT
ACAGCCGCAA CGGCCACGGG CGATGTCACC TATACCTTTA CCTTTAGTGA GAATGTGACC
GGCTTTGGTG TTGAGGATGT CACTGTAACT GGGGGCACAA AAGGGGCATT TACTGCCCTT
TCAGGCAGCC AATATACTTT GATCGTTACC CCAAGTGCAG AGAGTGTTGC GGATATCACC
GTTAATGTAG CAGCTGATAT TGCGCAGGAT GCCGCGGGCA ATAATAACCT TGTTGCATCT
GAATCCGTGC AAGCCGTGGA TACTGTTATT CCGACGGTAA TTATTAGTGA TGATACAGCC
GCAACGGCCA CGGGCGATGT CACCTATACC TTTACCTTTA GTGAGAATGT GACCGGCTTT
GGTGTTGAGG ATGTCACTGT AACCGGGGGC ACAAAAGGGG CATTTACTGC CGTTTCAGGC
AGCCAATATA CTTTGATCGT TACCCCAAGT GCTGAGAGTG TTGCGGATAT CACCGTTAAT
GTGGCAGCTG ATATTGCGCA GGATGCCGCG GGCAATAATA ACCTGGTGGC GACTGAATCC
GTGCAAGCCG TGGATACTGT TATTCCGACG GTAATTATTA GTGATGATAC AGCCGCAACG
GCCACGGGCG ATGTCACCTA TACCTTTACT TTTAGTGAGA ATGTGACCGG TTTTAGTGCT
GATGATGTCA CTTTGACGGG GGGCACAAAA GGGGCATTTA CTGTCCTTTC AGGCAGCCAA
TATACTTTGG TCGTTACCCC AAGTGCAGAG AGTGTTGCGA ATATCACCGT TAATGTGCCA
GGTAATGTTG CGATCGATGC TGTGGGTAAT AATAGCCTTG TTGCATCTGA ATCCGTGCAA
GCCGTGGATA CTGTTATTCC GACGGTAATT ATTAGTGATG ATACAGCCGC AACGGCCACG
GGCGATGTCA CCTATACCTT TACCTTTAGT GAGAATGTGA CCGGCTTTGG TGTTGAGGAT
GTCACTGTAA CTGGGGGCAA AAAAGGGGCA TTTACTGCCC TTTCAGGCAG CCAATATACT
TTGATCGTTA CCCCAAGTGC AGAGAGTGTT GCGGATATCA CCGTTAATGT AGCAGCTGAT
ATTGCGCAGG ATGCCGCGGG CAATAATAAC CTTGTTGCAT CTGAATCCGT GCAAGCCGTG
GATACCGTGG ATACTGTTAT TCCGACGGTA ATTATTAGTG ATGATACAGC CGCAACGGCC
ACGGGCGATG TCACCTATAC CTTTACCTTT AGTGAGAATG TGACCGGCTT TGGTGTTGAG
GATGTCACTG TAACTGGGGG CACAAAAGGG GCATTTACTA CCCTTTCAGG CAGCCAATAT
ACTTTGGTCG TTACCCCAAG TGCAGAGAGT GTTGCGGATA TCACCGTTAA TGTGGCAGCT
GATATTGCGC AGGATGCCGC GGGCAATAAT AACCTTGTTG CATCTGAATC CGTGCAAGCC
GTGGATACTG TTATTCCGAC GGTAATTATT AGTGATGATA CAGCCGCAAC GGCCACGGGC
GATGTCACCT ATACCTTTAC TTTTAGTGAG AATGTGACCG GTTTTAGTGC TGATGATGTC
ACTTTGACGG GGGGCACAAA AGGGGCATTT ACTGTCCTTT CAGGCAGCCA ATATACTTTG
GTCGTTACCC CAAGTGCAGA GAGTGTTGCG GATATCACCG TTAATGTGGC AGCTGATATT
GCGCAGGATG CCGCGGGCAA TAATAACCTT GTTGCATCTG AATCCGTGCA AGCCGTGGAT
ACTGTTATTC CGACGGTAAT TATTAGTGAT GATACAGCCG CAACGGCCAC GGGCGATGTC
ACCTATACCT TTACCTTTAG TGAGAATGTG ACCGGCTTTA GTGCTGATGA TGTCACTTTG
ACGGGGGGCA CAAAAGGGGC ATTTACTGCC CTTTCAGGCA GCCAATATAC TTTGGTCGTT
ACCCCAAGTG CAGAGAGTGT TGCGGATATC ACCGTTAATG TGGCAGCTAA TGTTGCGCAG
GATACCGCGG CCAATAATAG CCTGGTGGCG ACTGAATCAG TACAGGCGGT AGATACGGTG
ACTAGCAGCG CAGTCGAAGT GTTTTTCAAC CTCAATACTG GCGATACAAC GGATAACGGG
ACTAATGCCT TTGCCGCCGG CACTGTCTAT CATATTACCA TTTATACTGC AGCGTCCGAT
TCAGTGGCAA CCAATTCGAC GCAATGGACC GGGGGGGCTA ACCTTGATGG CGATGATACT
TTTACCTTCT CAACAGACAG TATCTTTGAT GGAGATTACC TGGATGGCAA GCTTGAATGG
ACCTCTCCGG GGCCTATAGT GCCGTTTGGG CCGACAGGAG TGCCGTTTGG GCCGATAGGA
GTGCCGTTTG GGCCGATAGG AGTGCCGTTT GGGCCGCCAG GAGTCCCTGT CACCACACCT
ATTCCCAGAA CATTGACTTT CTGGACAGGG GGAGCAAGTT CCGCTGGCTG GATGACTTAA
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| Protein sequence | MTALILRIAL PDGKQQTLAL LELQTLTASM GAVYTLVEQD TQQAPEALVL KRKGDDLEIE
VEGDLVAHID GFYSAEMNAT FSADGTVTPS EGMAVSSSDL LESVSVSDSG EAAVVWTAQE
SADFLGLPPS AWAGGLLAGA AGAIALVNNT DSYEVTLNPA AGPFIAVATV ELYDKNGNLL
GSKTHDFSTG PVSFTIDNGY QGPLLAKLID ANGDGGDYLD ETTGQLVSLG SSLRAMTVTD
GTGNVSMSIT PLSELAVRQA GVLDDNKVTE ENVTENEQVA KLFGVEDVLA LVTTVLDENY
NSIDGTSNAE QYGNVLALLS GIDSTTGSID ATLAQLTAFM VRQEDGTLAL TQTGVELLQA
GVVKFEASDN ADLADLADAL IVGPVIAAAK NGINKAEADQ GVSVQVANVT AGDTVNIHWG
DQNQSVVVSA DNLLEGVATI LVPKAKVDVA GEGSIGITSQ INTQQVSPAT IISVDFTGPV
ISSVNFSDTA LKVGETSLVT ITFNEAVSGF DINDITVENA ILSELSVTDN PRIYTAILTP
DAGVDDATNL ISLGSDYTNI EGNTGYVSNS SNYAIDTTVP TVTITDNISE TAIDDVTYTF
TFSENVRLFG VEDVTVTGGT KGAFTAVSGS QYTLVVTPSA ESVVDITVNV AADIAQDAAG
NNNLVASESV QAVDTVIPTV IISDDTAATA TGDVTYTFTF SENVTGFGVE DVTVTGGTKG
AFTAISGSQY TLIVTPSAES VVDITVNVAA DIAQDAAGNN NLVASESVQA VDTVIPTVII
SDDTTATATG EVIYTFTFNE DIDFSAADVT LTGGTKGAFI AVSGSQYTLV VTPSAESVAD
ITVNVAADIA QDAAGNNNLV ASESVQAVDT VIPTVIISDD TAATATGDVT YTFTFSENVT
GFGVEDVTVT GGTKGAFTAL SGSQYTLIVT PSAESVADIT VNVAADIAQD AAGNNNLVAS
ESVQAVDTVI PTVIISDDTA ATATGDVTYT FTFSENVTGF GVEDVTVTGG TKGAFTAVSG
SQYTLIVTPS AESVADITVN VAADIAQDAA GNNNLVATES VQAVDTVIPT VIISDDTAAT
ATGDVTYTFT FSENVTGFSA DDVTLTGGTK GAFTVLSGSQ YTLVVTPSAE SVANITVNVP
GNVAIDAVGN NSLVASESVQ AVDTVIPTVI ISDDTAATAT GDVTYTFTFS ENVTGFGVED
VTVTGGKKGA FTALSGSQYT LIVTPSAESV ADITVNVAAD IAQDAAGNNN LVASESVQAV
DTVDTVIPTV IISDDTAATA TGDVTYTFTF SENVTGFGVE DVTVTGGTKG AFTTLSGSQY
TLVVTPSAES VADITVNVAA DIAQDAAGNN NLVASESVQA VDTVIPTVII SDDTAATATG
DVTYTFTFSE NVTGFSADDV TLTGGTKGAF TVLSGSQYTL VVTPSAESVA DITVNVAADI
AQDAAGNNNL VASESVQAVD TVIPTVIISD DTAATATGDV TYTFTFSENV TGFSADDVTL
TGGTKGAFTA LSGSQYTLVV TPSAESVADI TVNVAANVAQ DTAANNSLVA TESVQAVDTV
TSSAVEVFFN LNTGDTTDNG TNAFAAGTVY HITIYTAASD SVATNSTQWT GGANLDGDDT
FTFSTDSIFD GDYLDGKLEW TSPGPIVPFG PTGVPFGPIG VPFGPIGVPF GPPGVPVTTP
IPRTLTFWTG GASSAGWMT
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