| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2817 |
|---|
| Symbol | |
|---|
| ID | 4625084 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 3463790 |
|---|
| End bp | 3465457 |
|---|
| Gene Length | 1668 bp |
|---|
| Protein Length | 555 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 639797939 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_944122 |
|---|
| Protein GI | 119946442 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.683396 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATTA AATCATCAAT TTTTATCGCC CTGTTTGTAG GATTTTTTTA TAGTCAGCTG
TTATCAGCCA CGCCGCAAGT ACTTACCTCA GTGAGTAATA ATCAGGTTTC ATTAGGTGAT
ATTTTTGTTT TAAACATCGA GATTGATGAT AGTGATTCCG ATTACCAACT AGATACAAGG
TCACTTGAAA AAGAGTTCAC TGTTTTTCGA CCTTCAAAAA GTCAGCGCAG CCAATATATT
AACGGCAATT TCACCCAACA AACCCAGTGG CAAATCAGGC TACAAGCAAA AATCACTGGA
AATCTGAGTA TTCCAGTATT AAAAATTGGC CCGCTAAAAA CACGGGAAAT CCAAATATCT
GTTACTCCAG CCTCAAAGCA GGCGACTAAA ATAGCCGATA ACCAAGTTTT TATGGAAAAC
AGTATTAACA AAGCCAGCCT TTATATAGGG CAACCGTTGA TCTTCACCAC GCGACTCTAT
ATTTCGCAAG CGACTGAAAA TATGAATCTT ATCGGCCCGG AACTAAAGGA TGCGGAGATT
GAGGTTTATG GCCAAGATCA AAATGGGGAG GCCGTTCGCA ACGGTATTCG TTATAAGACG
ATTACACGAC AGTTCCAAAT AACCACCAGT AAAGCCGGTG ATTTTATGAT CAATTCTCCA
TTGTTAAGCG GAGATTTAAG AAAAGTAGTT AATCTCAGTA ATCGGCAAAA CCAGGTCATT
TCTGTCCCCA TTAATGTTCG CGGTGACGGT CTCCAGCTAC AAGTAAAAGA TAAACCTACC
GATTATCAGG GCGAATGGCT AGTCAGTGAA GATGTACGTT TGCTTGACAA CACCCCATTA
ACACAACCAG ATTATCATCT GGGCGACCCC ATCACTCGCA CTATTACACT GCAAATTGCT
TCCATTAATA AAGATAAATT ACCAACTATC TCTTTCAATT ATCCGAAGGG GTTACGCTTT
TACCCGGATC AAGATGAAAT AAAAGAGGGA CAGTCAAATG GACTATTATA TTCACAAAGA
ACCATGCGCC ACGCAATAAT ACCAGACCAA GCGGGAGAGT TAACCTTGCC GGAAATAAAA
ATCCCCTGGT GGAATAGTCT TACGGACAAA CAGGAATATG CGGTTTTGCC GGCACAAACC
CTGACTATTC TAGGTGTCGA TAAACAAGCG ACCCGTTCCG AAAAAGCGCA GGAAAACATC
AATAAACCTG CTGCTACAAC CGTTAAAATT GATAATGGCC ACTTAATCTA CTGGCAGATA
ATAACAGCTC TGTTGCTATT AGGATTAATA ACATTACTCC TTTACCACCT CTCTTATCGT
CGCCGGCATG TACAACAGAA AGTGCACTCA ATGCCAGTTG CTAATCAGGC ATATTTAAAT
CTGCAGGATG CGCTGCAGCA AAATAATGCA CCACTGGTTT ATCAAAAATT GCTCATTTTT
TTACACGGAA AAAAGGTCAA TCTGAAAAGT CTTTCACAAT TAACCGAATT TATCCTTTTA
TCTAAAGAAG ATGAAAAAAA GTTTTTGAAG GAAATTAAAA TATTAGAGCA AGCATGTAGC
AGCGAACTAA AGCATTGGGA TGCGACAAAG CTCAGCAGCT TAATAAAAAA ACATTTAAAG
CAAACGACGG CGCTTCAAGG TAAGAGTATT ATGGATTTAA ATCCCTAA
|
|---|
| Protein sequence | MRIKSSIFIA LFVGFFYSQL LSATPQVLTS VSNNQVSLGD IFVLNIEIDD SDSDYQLDTR
SLEKEFTVFR PSKSQRSQYI NGNFTQQTQW QIRLQAKITG NLSIPVLKIG PLKTREIQIS
VTPASKQATK IADNQVFMEN SINKASLYIG QPLIFTTRLY ISQATENMNL IGPELKDAEI
EVYGQDQNGE AVRNGIRYKT ITRQFQITTS KAGDFMINSP LLSGDLRKVV NLSNRQNQVI
SVPINVRGDG LQLQVKDKPT DYQGEWLVSE DVRLLDNTPL TQPDYHLGDP ITRTITLQIA
SINKDKLPTI SFNYPKGLRF YPDQDEIKEG QSNGLLYSQR TMRHAIIPDQ AGELTLPEIK
IPWWNSLTDK QEYAVLPAQT LTILGVDKQA TRSEKAQENI NKPAATTVKI DNGHLIYWQI
ITALLLLGLI TLLLYHLSYR RRHVQQKVHS MPVANQAYLN LQDALQQNNA PLVYQKLLIF
LHGKKVNLKS LSQLTEFILL SKEDEKKFLK EIKILEQACS SELKHWDATK LSSLIKKHLK
QTTALQGKSI MDLNP
|
|---|
| |