Gene Ping_2785 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2785 
Symbol 
ID4627070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3427424 
End bp3428476 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content34% 
IMG OID639797908 
Producttranscriptional regulator of LacI family protein 
Protein accessionYP_944091 
Protein GI119946411 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.544473 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.623487 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCATA TGAATAAAAA GACGACGTTA AAAGATGTCG CCAGCGAGCT TGGAATTAGC 
AGCTCAACGG TCTCAAGGGC GTTAAACGAA AAGACAAAAA GCATGATCAA TGCAGCGCTT
GTTTTGAAAA TTGAGAAAAC CGCTGCAAAA ATGGAATACA GCATTAATCA TATAGCCCGT
AGTTTGAAAA ATGGGAAAAA GTACACGATT GGAATAATTA TTCCCGATTT AACAAATCCT
GTATTTGGTG AAATATCCGA TGAAATAATT GAATGTCTTG CAAGTTCTGA ATACAAAGCG
ATTATCATTT TTGCACAATC TAACTCAAGT GAATATCTTA AAAACATAAA ATATATCGCT
AGCAACCAAG TTGATGGGTT TATTTTTACC AATGCATATA TAGAGGACAT TGGTGTTAAG
TATTGTAAGG ATCATCGTAT TCCCTGCGTC ACTGTTGGTA GAACAACAGT GAACAAAGAC
ATCAGTCAAA TTTATACTGA CAATTGCCAA GGCATGAAAT TAATCATTGA GCATTTAGTC
GGCTTAGGTC ATGAAAATAT TGCTTTTATT GCTGGGCCAC AAGATATTTC TGATGGCTAC
GAGCGACTTA AATATTTTGA ACAATGGATG AAATTTTATA AAGCCAATTA TTGTGCCAAA
TCTATCATTA ATACTGAAAA ATTCAGCCGT TACTCAGGTT ATAAAGCGGC AGATAAATTG
TTTAATAAAA AATTAAGATT TACCGCAATT GTTGCAGCCA ATGATCTCTT GGCGGTTGGT
ATTATGGATT ATTTAAAAGA GCACGACATA ATATGTCCCA GAGAGGTATC CTTGGTTGGT
TTTAATGCAA TGCTATTTAG TGATGTATTT TCACCACCTT TAACCAGTGT TTATGTCGAT
AGAAAATTAA TGGCGAAACA ATCTGTTTTA TATTTACTCG ACGCTTTAAA CAAGAAAAAT
GATGCCATTA ATAAAGTCAA ACTAAATATC GTTGAACCTA AATTAATCAT TAGAGATTCA
ACTTGTCCAC CTAGAAAAAT CGCAATGAAC TGA
 
Protein sequence
MPHMNKKTTL KDVASELGIS SSTVSRALNE KTKSMINAAL VLKIEKTAAK MEYSINHIAR 
SLKNGKKYTI GIIIPDLTNP VFGEISDEII ECLASSEYKA IIIFAQSNSS EYLKNIKYIA
SNQVDGFIFT NAYIEDIGVK YCKDHRIPCV TVGRTTVNKD ISQIYTDNCQ GMKLIIEHLV
GLGHENIAFI AGPQDISDGY ERLKYFEQWM KFYKANYCAK SIINTEKFSR YSGYKAADKL
FNKKLRFTAI VAANDLLAVG IMDYLKEHDI ICPREVSLVG FNAMLFSDVF SPPLTSVYVD
RKLMAKQSVL YLLDALNKKN DAINKVKLNI VEPKLIIRDS TCPPRKIAMN