Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_2748 |
Symbol | |
ID | 4626009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 3371308 |
End bp | 3372714 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 639797868 |
Product | 4-aminobutyrate aminotransferase |
Protein accession | YP_944054 |
Protein GI | 119946374 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAAG TCATGCCTGA TAAGGCACAT CTGCGCAGTG AAGGTGATCT AAATACCACA AAAGCCAGGC AAGACTGGCA ACATAAACAG CAGCATCAAC AGACAAAAAC ACTGCTAAAA CGGGATGCCG ATGTGTTTTT ACATCAAGCT ATGTCAACAC CCTGTTTAAA CAGTTTAGCG TCAGCTGAAG GTATTTATAT CACCGACAGC AGTGGTCATT CTTATATGGA TTTCCACGGT AATAATGTCC ATCAATTAGG TTATGGCCAC CCTGTACTGA TTGAAAAAGT AACCAAGCAA ATAAGTCAAT TACCCTTTTC ACCGCGGCGT TTTACTAATG AAACGGCCAT TGAATGCGCT GAAAAGCTCA GTGAGATTTG CGGTGGAGAG TTAAACCGGG TGTTATTTGC ACCCGGTGGC ACCTCGGTGA TTGGCATGGC ATTAAAACTG GCGCGATATA TTAGTGGAAA TTATAAAGTA GTTTCCCTTT GGGATTCCTT TCACGGAGCG TCACTGGATG CGATTTCAGT CGGGGGAGAA GCCTGTTTTC GTGAAGGTAT GGGGCCATTA ATGGCAGGCG TTGAGCGTAT TCCACCGCCT GTTACCTACC GTGGTGCATT GACCAGTCCC GATGGTAGTG ATCTGCATTA TGCGGATTAC CTTGAATATG TAATTGAAAA AGAAGGCGGC ATTGGGGCTT TTATTGCAGA AGCCGTGCGA AATACCGATG TGCAGGTGCC AAGCAAAGCT TACTGGAAAC GTATTCGTGA GATTTGTGAT AAACATAATG TGTTATTAAT TATCGATGAT ATCCCTAACG GCATGGGCCG CAGTGGCCAC TGGTTTACTC ATCAGGCATT TGATATTGAA CCCGATATTC TTTGTATCGG CAAAGGCTTA GGGGGCGGAT TAGTACCGAT GGCCGCCATG ATAACCAAAG ATAAATACAA TACCGCTACC CATATTTCTC TGGGGCATTA TACCCATGAG AAAAGCCCTA TTGGTTGCGC AGCGGCACTT GCTACCATCC AAATCATTGA ACAGGAGCAA CTGCTCAGTC AAGTTAAGCT GCATAGTTTA TATATTGAGC AGCGTTTATT AAAGCTTAAA GAAAATCACC CTTTGATTGG TGATATCCGC GGCATTGGTT TGCTCTGGGC GGTAGAATTA GTGACCGATA GAAACACTAA AACCCGCGCA TTTGATCAAG CCGAAGCCCT GTTATATGAA TGCCTGGCAC AAGGGCTTAG CTTTAAAATA TCTCAGGGTA ATGTGATCCA GCTCAGCCCC CCGCTTATTA TCAGCCACAC ACAATTACAG AATGCACTTG ATCTCTTTGA ACAAGCCCTT AAAAATATAA CTCAGGATTC ACATTATGAA GAATGCCATG AACAGCACCA TAAATAA
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Protein sequence | MNKVMPDKAH LRSEGDLNTT KARQDWQHKQ QHQQTKTLLK RDADVFLHQA MSTPCLNSLA SAEGIYITDS SGHSYMDFHG NNVHQLGYGH PVLIEKVTKQ ISQLPFSPRR FTNETAIECA EKLSEICGGE LNRVLFAPGG TSVIGMALKL ARYISGNYKV VSLWDSFHGA SLDAISVGGE ACFREGMGPL MAGVERIPPP VTYRGALTSP DGSDLHYADY LEYVIEKEGG IGAFIAEAVR NTDVQVPSKA YWKRIREICD KHNVLLIIDD IPNGMGRSGH WFTHQAFDIE PDILCIGKGL GGGLVPMAAM ITKDKYNTAT HISLGHYTHE KSPIGCAAAL ATIQIIEQEQ LLSQVKLHSL YIEQRLLKLK ENHPLIGDIR GIGLLWAVEL VTDRNTKTRA FDQAEALLYE CLAQGLSFKI SQGNVIQLSP PLIISHTQLQ NALDLFEQAL KNITQDSHYE ECHEQHHK
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