Gene Ping_2748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2748 
Symbol 
ID4626009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3371308 
End bp3372714 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content44% 
IMG OID639797868 
Product4-aminobutyrate aminotransferase 
Protein accessionYP_944054 
Protein GI119946374 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0160] 4-aminobutyrate aminotransferase and related aminotransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAG TCATGCCTGA TAAGGCACAT CTGCGCAGTG AAGGTGATCT AAATACCACA 
AAAGCCAGGC AAGACTGGCA ACATAAACAG CAGCATCAAC AGACAAAAAC ACTGCTAAAA
CGGGATGCCG ATGTGTTTTT ACATCAAGCT ATGTCAACAC CCTGTTTAAA CAGTTTAGCG
TCAGCTGAAG GTATTTATAT CACCGACAGC AGTGGTCATT CTTATATGGA TTTCCACGGT
AATAATGTCC ATCAATTAGG TTATGGCCAC CCTGTACTGA TTGAAAAAGT AACCAAGCAA
ATAAGTCAAT TACCCTTTTC ACCGCGGCGT TTTACTAATG AAACGGCCAT TGAATGCGCT
GAAAAGCTCA GTGAGATTTG CGGTGGAGAG TTAAACCGGG TGTTATTTGC ACCCGGTGGC
ACCTCGGTGA TTGGCATGGC ATTAAAACTG GCGCGATATA TTAGTGGAAA TTATAAAGTA
GTTTCCCTTT GGGATTCCTT TCACGGAGCG TCACTGGATG CGATTTCAGT CGGGGGAGAA
GCCTGTTTTC GTGAAGGTAT GGGGCCATTA ATGGCAGGCG TTGAGCGTAT TCCACCGCCT
GTTACCTACC GTGGTGCATT GACCAGTCCC GATGGTAGTG ATCTGCATTA TGCGGATTAC
CTTGAATATG TAATTGAAAA AGAAGGCGGC ATTGGGGCTT TTATTGCAGA AGCCGTGCGA
AATACCGATG TGCAGGTGCC AAGCAAAGCT TACTGGAAAC GTATTCGTGA GATTTGTGAT
AAACATAATG TGTTATTAAT TATCGATGAT ATCCCTAACG GCATGGGCCG CAGTGGCCAC
TGGTTTACTC ATCAGGCATT TGATATTGAA CCCGATATTC TTTGTATCGG CAAAGGCTTA
GGGGGCGGAT TAGTACCGAT GGCCGCCATG ATAACCAAAG ATAAATACAA TACCGCTACC
CATATTTCTC TGGGGCATTA TACCCATGAG AAAAGCCCTA TTGGTTGCGC AGCGGCACTT
GCTACCATCC AAATCATTGA ACAGGAGCAA CTGCTCAGTC AAGTTAAGCT GCATAGTTTA
TATATTGAGC AGCGTTTATT AAAGCTTAAA GAAAATCACC CTTTGATTGG TGATATCCGC
GGCATTGGTT TGCTCTGGGC GGTAGAATTA GTGACCGATA GAAACACTAA AACCCGCGCA
TTTGATCAAG CCGAAGCCCT GTTATATGAA TGCCTGGCAC AAGGGCTTAG CTTTAAAATA
TCTCAGGGTA ATGTGATCCA GCTCAGCCCC CCGCTTATTA TCAGCCACAC ACAATTACAG
AATGCACTTG ATCTCTTTGA ACAAGCCCTT AAAAATATAA CTCAGGATTC ACATTATGAA
GAATGCCATG AACAGCACCA TAAATAA
 
Protein sequence
MNKVMPDKAH LRSEGDLNTT KARQDWQHKQ QHQQTKTLLK RDADVFLHQA MSTPCLNSLA 
SAEGIYITDS SGHSYMDFHG NNVHQLGYGH PVLIEKVTKQ ISQLPFSPRR FTNETAIECA
EKLSEICGGE LNRVLFAPGG TSVIGMALKL ARYISGNYKV VSLWDSFHGA SLDAISVGGE
ACFREGMGPL MAGVERIPPP VTYRGALTSP DGSDLHYADY LEYVIEKEGG IGAFIAEAVR
NTDVQVPSKA YWKRIREICD KHNVLLIIDD IPNGMGRSGH WFTHQAFDIE PDILCIGKGL
GGGLVPMAAM ITKDKYNTAT HISLGHYTHE KSPIGCAAAL ATIQIIEQEQ LLSQVKLHSL
YIEQRLLKLK ENHPLIGDIR GIGLLWAVEL VTDRNTKTRA FDQAEALLYE CLAQGLSFKI
SQGNVIQLSP PLIISHTQLQ NALDLFEQAL KNITQDSHYE ECHEQHHK