Gene Ping_2727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2727 
Symbol 
ID4626389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3345370 
End bp3345996 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content43% 
IMG OID639797850 
ProductDNA-binding transcriptional regulator 
Protein accessionYP_944036 
Protein GI119946356 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.118237 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGATC TGAATGAACA AGATATTTAT CCGTCAATGA AAATTTCTAA CGATCGGGGA 
TCAGACAAAA TAGAGCCCGT TAAACTCGGA GAGCGTTTAA AAGAAATTCG CAAGTCATTC
GGTTTGACGC TGGAAGAAGC CAGCAAGAAA ACTGGACTAG CACGTTCTAC GTTATCTAAA
ATAGAAAATG AACAGATATC ACCAACCTTT CAGGCAATGC AGAAATTGAC TCGGGGTTTA
CAGATAGATC TTCCGCAGCT TTTTGCGCCG CCCAAACAGG TCAGTGCGAC CGGTCGCCGT
GACATTACGC GTAATAACGA GGGCAAGGCG CATCCGACTT CAACCTATGA ACATGAATTA
TTGGCCACGC AGTTAACCAA TAAAAAAATG ATGCCCTTCA AGTCGCGGGT CAGGGCGCGT
GATTTTTCGG ATTATTCGGA TTGGATCCGC CACGCCGGAG ATGAATTTTT ATTAGTATTA
AGTGGTGATA TAACCTTTTT TTCAGAATTT TATGAACCCG TCACGTTAAA TGAAGGCGAT
TCGGTCTACT ACGATGCGAA TATGGGGCAC ATGCTTATTT CCAGTAGCGA AGAAGATGCT
TTAATCCTTT GGGTGACCGC TTCATAA
 
Protein sequence
MTDLNEQDIY PSMKISNDRG SDKIEPVKLG ERLKEIRKSF GLTLEEASKK TGLARSTLSK 
IENEQISPTF QAMQKLTRGL QIDLPQLFAP PKQVSATGRR DITRNNEGKA HPTSTYEHEL
LATQLTNKKM MPFKSRVRAR DFSDYSDWIR HAGDEFLLVL SGDITFFSEF YEPVTLNEGD
SVYYDANMGH MLISSSEEDA LILWVTAS