| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2709 |
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| Symbol | |
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| ID | 4625888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 3324453 |
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| End bp | 3325817 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 639797832 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_944018 |
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| Protein GI | 119946338 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.74149 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.13379 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACAGAA CGGAAATAAT CGCCCTCGGA AGAGATATTT TTAAGCAAAC TTGGCCAATG
GTTTTTGGTA TTTTGTCTTT AATGAGTTTT CAACTCGCAG ACAGTGCTTT TATAAGTCAA
CTTGGTGTTT TGCCATTAGC TGTACAGGGT TTTACCATGC CATTACAGAT GCTGTTTATT
GGCCTGCAGG TGGGATTAGG TATTGCGACA ACGGCGGTTA TTTCAAGAAT GTTAGGCCAA
AAAAAAGAAA ATAGAGCCAG ACAGATTGGC GGATTAGTCC TTATAATGGG CGCCGTTGGG
GTCTTTGTCA TCGCACTTCT TATGTGGTTT ATGCGCCAGC AAATATTAAC CCTGTTGGGT
GCCTCGGCGG AAGTGAATCC CTATATAAAT GAATACTGGC CTGTCTGGTT ATGCAGTGCA
TGGTTAGGTG CCATGCTGTA TTTTACTTAT AGTATTTGCC GCTCTCATGG TAACAATTTT
TTCCCAGGTA TATTAATGAT GGCAACCAGT ATTATTAATA TTGCCCTGGA TCCTATTTTT
ATCTTTTATT TTGATTTAGG TTTGCAGGGG GCAGCGATCG CAAGTATCTG TTCATTCAGT
ATTGGCCTGT TTATTATTCT CCCCAAATTA GTGAGCAACA ACTGGATCTC CTTTGATTGG
GCTTCTCTGC CTGTCTGGAC GTCAATTAAA GAGGTTAACG CAATAATGAC GCCCGCTATG
ATGGGGCAAT TATTACCGCC GCTTGCATCG GTTTTTGTGA CTAAAATAGT GGCCGTTTTT
GGGGTTGCTG CGGTTGCCGG ATGGGCAATG GCATCGCGCA TTGAGTTTTT TACTTTAGTT
GTTGTGCTGG CGTTAACCAT GTCACTGCCA CCTATGGTTG GGCGATTATA TGGCGCCAAA
GATTGCACAA CAATTATTAG CTTAGTCAAA ATAGTGGTTC TCTTCAGTCT TCTTTTGCAG
GCGGTATTAG CCGCTATTCT GTTTGTTTTT GCCGCGCCTT TGGCTGCATT TTTCAGCGCA
GACAGTCAAG TTCAAAGCGT TATTTATCAG TATTTGCTTC TGGTTCCCAT TAGTTTAGGT
TCATTGGGCA TCTGCATGTT AATGGTTTCT GTCTGTAATT CATTGGAAAT GCCGATGCGC
GCATTACTTA TTTCAGCCTT ACGTCTGTTC CTTTGCTACT TGCCTTTAGT CTGGATAGCC
AGCCAGTTGT GGTTGTTAGA AGGGGTTATT ATTGGTGCCA TGCTCGGCAA TACTCTGGCC
GGTTTAATGG CCTGGAGCCT TTATTATAAT GCTATTAAAA AGATCAAACC CGCTGTTCCG
AAAATAGAAC CTGTTTTGGA GTCTAGCCTC GACTTTAAAA CCTAA
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| Protein sequence | MNRTEIIALG RDIFKQTWPM VFGILSLMSF QLADSAFISQ LGVLPLAVQG FTMPLQMLFI
GLQVGLGIAT TAVISRMLGQ KKENRARQIG GLVLIMGAVG VFVIALLMWF MRQQILTLLG
ASAEVNPYIN EYWPVWLCSA WLGAMLYFTY SICRSHGNNF FPGILMMATS IINIALDPIF
IFYFDLGLQG AAIASICSFS IGLFIILPKL VSNNWISFDW ASLPVWTSIK EVNAIMTPAM
MGQLLPPLAS VFVTKIVAVF GVAAVAGWAM ASRIEFFTLV VVLALTMSLP PMVGRLYGAK
DCTTIISLVK IVVLFSLLLQ AVLAAILFVF AAPLAAFFSA DSQVQSVIYQ YLLLVPISLG
SLGICMLMVS VCNSLEMPMR ALLISALRLF LCYLPLVWIA SQLWLLEGVI IGAMLGNTLA
GLMAWSLYYN AIKKIKPAVP KIEPVLESSL DFKT
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