| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2702 |
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| Symbol | |
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| ID | 4625414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 3313510 |
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| End bp | 3315894 |
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| Gene Length | 2385 bp |
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| Protein Length | 794 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 639797825 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_944011 |
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| Protein GI | 119946331 |
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| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
[COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0564678 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.658888 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCTAATA TTATAAGAGT TTTTGTTTGT TTATGTACCT TGCTGAGTCA GCAATTATTC
GCTGACGAGC TAAAAAAGGT AACACTGCAA CCCTCCTGGT TCGAACAATT CCAATCTGCC
GGTTATTATA TTGCTCAAGA AAAGGGTTTT TATAATGACG TCGGATTAGA CGTTACTATC
AAAGATTATC AGTTTGGGAG CGATGCTGTA CAAAAAATCA ATGATGGTGA AATTGATTTT
GCCGTCGGTT ACGAGAGCAT AATACTTGGT AAGGCCAACC ATAAAAAAAT TGTCATTTTA
TATGCCCTTT TTCAATCAAG TCCGCTTGTC CTGCTCAGTA CCAAAGCATC AAAAATCAAT
AGCATCAGTC AGTTTGTTGG TAAAAAAATA ATGACCACAA ACAATGATTT TGCTCAAGCC
TCATTAAAAG CAATGCTCAA TTCAAATTAT GTAGATTTGG AGAATGTAAA TCTACTGCCC
CATTCGCACA ATATAAATGA TTTGGTCAAT AAAAAAACAG ATCTGATCAG CGCTTATATA
TCAAAAGCAC CCTACGAGTT AGATAAAATG GGGGTTACAT ATAATATTTT TGACCCTAAA
GATTATGGTT TTGATATGTA CAGTGATTTT TTATATACCA GTGAAGCATT GATTGCAAAA
GATATCACCA CGGTTAAGGC ATTTAAAGCG GCTTCATTAA AAGGTTGGCA ATACGCATTT
ACCCATATAA CTGAAACGGC CGATTTAATC TTTGCTAAAT ATAATGAGCA AAATTTAACC
AAAGAAGAGC TTGTGTTCGA AGGAAAAAAG CTTAAAAAGT TAGCATTTTT TAACACCGAT
CAGATAGGTG AAATAGATAA CAATAAATTA AAAAGAATTT TAGAACTATA CAAAGTATTA
GGCGTGACAA AAGGAAATGT TGATTTTACA CAGCTTGTTT TTGACGAAAA AAATCCCAGA
TTAATTTTAA CCGCAGAAGA ACGTACTTAT TTGAATCAGA AAAAACAGAT TACTATGTGT
ATTGACCCCA ATTGGCTGCC CTATGAAGGT TTTGATCAAC AAGGCAAGCA TATTGGTTTA
AATAGAGAAT TTATTGATAT TTTTAGAAAG CAGCTACCGA TTCCTATTGA AATAGTCCAA
ACCAGCTCCT GGAGTGAGTC TCTGCAATTT GCAGAAGAGA GAAAATGTGA CCTGCTATCT
TTAGCTGCAA AAACTGAAGA GAGAACAAAA TATCTCAATT TCACCTCTCC TTATTTAGTC
ACCCCGCGTG TTTTAGTCAC TAAAACTCAT ATCCCATTTA TAGATAATTT TACGAATCTG
TCCAATAAAA AAATAGGCGT GCCAAAAGGT TATGAACAGG AAGAAATCAT TCGACAAGAT
TATCCAAATA TCATCATAGT AGAAGTTAAT ACGATAAAAG ACGGGCTTGA AAAAGTGGAA
AATGGCGAAC TTTATGGACT GATAGGCGGG CTCGACACTG TTGGTCACCT ATTACAGGGT
CGTTTTATTG GGCAACTCAA AGTCAGTGGA AAACTTGATG AAAAAATGGA AGTTGGCATT
GGGGTCAGAA ATGATGACCT ATTACTTTTG CAAGTCTCTG AAAAACTAGT CAATAATTTA
TCAGAAGAAA TAAAACAAAG TATCATTAAT AACAGCAGTG CGATTAAATA TAAAGAAGAG
TTTAATTATA AATTATTATG GCGGGTGCTG TTTGTTGTCT TGCTGTTGAT TGCTTTTTTC
TCATATCGGC AATGGCTGCT AACAAAGTTA AATAAGACGC TAAATAAAAA AATAAATCAG
AAAACTGCAG CATTACAGGA GCTAAATGAA AGCCTTGAAA GAAGAATAAA GGAGAGGACC
CAAAAGATAG AACATTCAAA AATGCTGTTG CAAGATGTCG CTTTTAAAGA TAATTTAACC
AGTATTTTTA ACCGGCATTA CCTTTTTGAA ATATCACCGA TGCTTTTAAC TGTATCTGAA
GAGACGCAGA CACCTTTATC ACTGTTGTTA ATTGATGTTG ATCACTTCAA AAAAATCAAT
GATACCTATG GCCATTTGAC TGGCGATAAT ATATTGAAAT TTATTGTGAA AAATATTCAG
GCAATATTAA GAGCAGATGA TATTTTTGTG CGCTTTGGCG GGGAAGAGTT TATTATTTTA
CTGCCTAAAG CAAACCTTGA AGAAAGTGTG ATGGTTGCAG AAAAACTACG ACTCAGTGTG
GAGCAAAATA ATTACCACAA AAACGGTATG GATATTTCTA TCACCGTTAG TATTGGGGCC
AGCCAGTACC AGCATACTGA GACCTTAGAA AAATTAATCA GTCGGGCTGA TTTGGCATTA
TATAGCGCAA AAGAAAAGGG GCGAAATCAA GTTAAAAAAA ATTAA
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| Protein sequence | MPNIIRVFVC LCTLLSQQLF ADELKKVTLQ PSWFEQFQSA GYYIAQEKGF YNDVGLDVTI
KDYQFGSDAV QKINDGEIDF AVGYESIILG KANHKKIVIL YALFQSSPLV LLSTKASKIN
SISQFVGKKI MTTNNDFAQA SLKAMLNSNY VDLENVNLLP HSHNINDLVN KKTDLISAYI
SKAPYELDKM GVTYNIFDPK DYGFDMYSDF LYTSEALIAK DITTVKAFKA ASLKGWQYAF
THITETADLI FAKYNEQNLT KEELVFEGKK LKKLAFFNTD QIGEIDNNKL KRILELYKVL
GVTKGNVDFT QLVFDEKNPR LILTAEERTY LNQKKQITMC IDPNWLPYEG FDQQGKHIGL
NREFIDIFRK QLPIPIEIVQ TSSWSESLQF AEERKCDLLS LAAKTEERTK YLNFTSPYLV
TPRVLVTKTH IPFIDNFTNL SNKKIGVPKG YEQEEIIRQD YPNIIIVEVN TIKDGLEKVE
NGELYGLIGG LDTVGHLLQG RFIGQLKVSG KLDEKMEVGI GVRNDDLLLL QVSEKLVNNL
SEEIKQSIIN NSSAIKYKEE FNYKLLWRVL FVVLLLIAFF SYRQWLLTKL NKTLNKKINQ
KTAALQELNE SLERRIKERT QKIEHSKMLL QDVAFKDNLT SIFNRHYLFE ISPMLLTVSE
ETQTPLSLLL IDVDHFKKIN DTYGHLTGDN ILKFIVKNIQ AILRADDIFV RFGGEEFIIL
LPKANLEESV MVAEKLRLSV EQNNYHKNGM DISITVSIGA SQYQHTETLE KLISRADLAL
YSAKEKGRNQ VKKN
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