| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2701 |
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| Symbol | |
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| ID | 4625413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 3312858 |
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| End bp | 3313427 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 639797824 |
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| Product | cold-shock DNA-binding domain-containing protein |
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| Protein accession | YP_944010 |
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| Protein GI | 119946330 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription |
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| COG ID | [COG1278] Cold shock proteins
[COG1544] Ribosome-associated protein Y (PSrp-1) |
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| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.282479 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.669398 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACAGC CACTACAAAT AACTTTTCGC GATATGCCGC ACTCAGATGC AGTTGAAACT
CATATCCGGG AGAAGGTCGC CAAACTCGAC GAATTTTATG ATCATATTAT GGCTTGCCAT
GTTGTGATTG AACAACCCCA TGCGCATCAT CAGCAGGGTA AATTGTTCCG TGTATCTATC
GATTTGACTC TGCCAGATGG TGAACTTTTA GTGAATCGTT CAGCACCGGA ACATCACGCT
CACGAAGATG CCTATGTCGC TATACGTGAT GCTTTTAAAT CGATACGCAG ACAGATGCAG
GACTTTGTCA GAAAGCAGCG CGGCAAAGTA AAAACACATG AGACCCCTGA CCATGGCAAA
ATCTCTGTAG TTCGAGGTGA CAAGGATTTC GGCCGGATAC TGACGGCAGA TGGAAGAGAT
ATTTACTTTC ACCGAAACAG TCTGGTCGAT AGCGGGTTCG ATGCCCTGGA AATAGGCAAT
GAGGTTCGAT TTGTCGAAGA AGCCGGTGAC CAAGGTCCCC AGGCCAGCAG CGTACGTCTG
ATTGGCAAAC ACCATATTGT TGGTGAGTAA
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| Protein sequence | MKQPLQITFR DMPHSDAVET HIREKVAKLD EFYDHIMACH VVIEQPHAHH QQGKLFRVSI
DLTLPDGELL VNRSAPEHHA HEDAYVAIRD AFKSIRRQMQ DFVRKQRGKV KTHETPDHGK
ISVVRGDKDF GRILTADGRD IYFHRNSLVD SGFDALEIGN EVRFVEEAGD QGPQASSVRL
IGKHHIVGE
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