Gene Ping_2555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2555 
Symbol 
ID4624205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3125861 
End bp3127258 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content39% 
IMG OID639797684 
Producthypothetical protein 
Protein accessionYP_943875 
Protein GI119946195 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG1061] DNA or RNA helicases of superfamily II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.813616 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAAGAG CTTGGCAACA AGAATGTTTA ACCACAGCAC AAAAACATTA TTTAGAAATC 
AGTAAACACT TTTTATGTTT AGCAACACCC GCTTCTGGGA AAACCGTATT AGCCGCTGAA
GTTGCAGGGT ATTTGTTTGA TACAAAGCAA ATAGATTTTG TTTTATGTTT CTCACCGTCG
ATTACTGTGG CTGAAGGTAT TAAGAATGCC TTTGCACGTC GACTCAATTG TAATTTCGAT
GGTGTTATTG GCGCTATTGG TTGCTCATAT ACTTATCAGA ACATGCGATT TTTTAACGAG
GATAATTGGA AGATTATTAA GAATAATAGA GTGTTAGTGG TGTTTGATGA AATCCATCAC
TGCTCAGGCA CATCTTTCGA TGATGCGAAC GCCTGGGGGC AGGATATAGT GCAACACATT
CAAGAACAAG CCACATTCAC TTTGGCGCTG ACCGGGACTC CTTGGCGTTC AGATCTCATC
CCAATTGCGC TTGCTAATTA CAGCGACCCT GATAATAAAA TTCAATGTGA TTACACCTAT
TCATTGCAAC AAGCCGTCGA TGATAGCGTT TGCAGAAACC CTAAGATCGT TTTAATTGAT
AACGAAGAAA TATCAGTGAC GACTAAAGAG CAAGAAACCA AAGTCTTTAA CTCACTGCGT
GATTTATTAA AAGCACCTTT AATTTCTTAT CAGGATTTAA TCTGTCATGA GGTAGTTATT
CAATATATCT TAGAAAAAGG CTGTAACAAA CTCGCTGAGA TTAGGCAGTC AAATTCAAAT
GCAGGCGGAC TAATTGTTGC TTCATCGGTG GAACATGCAC AGCAGATATT GAAAATGCTC
ACTGAACAGT TCCAGCAAAC CGCCGTTATT GTGACTTATA AAGAGACCGA TGCAGCTGAA
CGAATCAAGA ATTTTCGTTT CTATAATACC GAGTGGATTG TCAGCGTTGG CATGGTTGCG
GAAGGTACTG ACATACCTCG ATTACAGGTT TGCTGTCATT TAAGCCGGGT TAAAACTGAA
CTGTATTTCA GGCAAGTTTT AGGTCGAATT TTAAGAGTAA ATGACGCTGT AAATCAGGAA
GCTTGGTTGT TCACTTTTGC TGAAGAAAAG TTAAGTATAT TTGCCCACCG AATAGATCAA
GAATTACCTG ATGCAGGTGT CTTAGTGCGC AGTAATGCCA TTGCTAAGCA ATTTGATATA
ACTACTGCTA ATAAAAAATC AGCTTCATCT TCAACTGACT TGAAACCACC ATTAATAATG
TCATTATTCG ATGACGGATC TTTCTCGGAC AATTTAAACG ATGCACCATC AGAAAATAAA
AAAAACGATA CTCCGGCTTA CCTAAAGTCT TTTGGTGGCT TTAGAGAAAA ACTGATTGAA
GCGTTTAGCT CGATATAG
 
Protein sequence
MLRAWQQECL TTAQKHYLEI SKHFLCLATP ASGKTVLAAE VAGYLFDTKQ IDFVLCFSPS 
ITVAEGIKNA FARRLNCNFD GVIGAIGCSY TYQNMRFFNE DNWKIIKNNR VLVVFDEIHH
CSGTSFDDAN AWGQDIVQHI QEQATFTLAL TGTPWRSDLI PIALANYSDP DNKIQCDYTY
SLQQAVDDSV CRNPKIVLID NEEISVTTKE QETKVFNSLR DLLKAPLISY QDLICHEVVI
QYILEKGCNK LAEIRQSNSN AGGLIVASSV EHAQQILKML TEQFQQTAVI VTYKETDAAE
RIKNFRFYNT EWIVSVGMVA EGTDIPRLQV CCHLSRVKTE LYFRQVLGRI LRVNDAVNQE
AWLFTFAEEK LSIFAHRIDQ ELPDAGVLVR SNAIAKQFDI TTANKKSASS STDLKPPLIM
SLFDDGSFSD NLNDAPSENK KNDTPAYLKS FGGFREKLIE AFSSI