Gene Ping_2547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2547 
Symbol 
ID4624121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3115241 
End bp3116449 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content41% 
IMG OID639797673 
Productmajor facilitator transporter 
Protein accessionYP_943867 
Protein GI119946187 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTTTA GTAAACAATC AATCACCTAT TTATTGACCT GTTTTTTTAT CGGGCTAAGT 
ACCGCGTTTA TTTATCCCCT ATTAAGTCTT TATCTGATTG AAGAAGTTCA TGCCACCCCG
ATCAGCATGG GTATTTTAAT TACCTGCATG GTGTTAAGTG GCGTATTGGT CTCGCAATAT
ATAGCAAAAA AATCAGATCA GGGCTTAAGT CGCAAGTATA TTATTTTAGC AGGACAAGTC
GGGTTTATTA TCACTACGAT TTTTTTGGCA ATGAGTCAGC ACTATTACAC GCTATTATTT
GCGGTTGTTT TTTTTATGCC CTTCAGTGCG GCTTGTTTAC CACAAATTTT CAGCATGGGA
CGTCATTTTG CAGATAAACA GCTTGCTGAT AAAGCGACTG TATTTATGAC CATGATGCGT
GCAACCATGT CGATGTCTTG GGTGATTGGG CCACCCGTAG CCTTTTTAAT CAATGATGCT
TTCGGGTTTA AACAAACCTT TCTGCTGGCA GGATTTTTTG CTGTGGTCGT CTTAATTATT
GTTTGTGTGG GGATATCTAA TGTGCAGATT GAAAAGGTCA AGTCTGCTCC AAAAAATGTG
AATTGGTCAA AGATATCTGG CGTTTTATTC TTTTTGATCT GTATCTTTTT TATCTTTACT
GCCAACAATA TGTACATTAC ATCAATCAGC CTTTATATCA CTCAAGCGTT AGATTTTGAT
TCTAAATGGG TGGGTTACCT GATGGGCACG GCGGCCTTTG TGGAAATTCC AATAATGTTA
GGCGCAGGCT ATCTTGCGCC AAGGTTCGGT GCAACGCGAC TGATCAATAT TGCGATTATT
AGCGGCCTGC TATTTTTTGC GGGTTTGCTG GTTGCAGAGC AGCTCTGGCA GTTTATATTG
CTGCAGCTGT TTAACGGTGT TTTTATTGGT ATCAATGCCA GTTTAGGCAT GCTGGTTGTA
CAGGATATGA TGAAAAAGCA GATAGGGTTA GCCTCAACAT TGTTTAATAA CAGCCTCCTA
CTGAGCGTTT TATTAAGCAG CCTTCTCGTG GGGGGAATCG CACAATATTT CAGTTATTAT
GCGGTATTTG TTGTCTCCGC CCTATTTTGT TTAATTGCCC TGTTTTTTAT GCGGTTAGCA
GAAAGGCAAT GCTTGTCTGT AAAGCCTGAA GGCTTAACGC CTGAAGGCCT TAAAGCCGGA
ACGATGTAA
 
Protein sequence
MFFSKQSITY LLTCFFIGLS TAFIYPLLSL YLIEEVHATP ISMGILITCM VLSGVLVSQY 
IAKKSDQGLS RKYIILAGQV GFIITTIFLA MSQHYYTLLF AVVFFMPFSA ACLPQIFSMG
RHFADKQLAD KATVFMTMMR ATMSMSWVIG PPVAFLINDA FGFKQTFLLA GFFAVVVLII
VCVGISNVQI EKVKSAPKNV NWSKISGVLF FLICIFFIFT ANNMYITSIS LYITQALDFD
SKWVGYLMGT AAFVEIPIML GAGYLAPRFG ATRLINIAII SGLLFFAGLL VAEQLWQFIL
LQLFNGVFIG INASLGMLVV QDMMKKQIGL ASTLFNNSLL LSVLLSSLLV GGIAQYFSYY
AVFVVSALFC LIALFFMRLA ERQCLSVKPE GLTPEGLKAG TM