Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_2547 |
Symbol | |
ID | 4624121 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 3115241 |
End bp | 3116449 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639797673 |
Product | major facilitator transporter |
Protein accession | YP_943867 |
Protein GI | 119946187 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCTTTA GTAAACAATC AATCACCTAT TTATTGACCT GTTTTTTTAT CGGGCTAAGT ACCGCGTTTA TTTATCCCCT ATTAAGTCTT TATCTGATTG AAGAAGTTCA TGCCACCCCG ATCAGCATGG GTATTTTAAT TACCTGCATG GTGTTAAGTG GCGTATTGGT CTCGCAATAT ATAGCAAAAA AATCAGATCA GGGCTTAAGT CGCAAGTATA TTATTTTAGC AGGACAAGTC GGGTTTATTA TCACTACGAT TTTTTTGGCA ATGAGTCAGC ACTATTACAC GCTATTATTT GCGGTTGTTT TTTTTATGCC CTTCAGTGCG GCTTGTTTAC CACAAATTTT CAGCATGGGA CGTCATTTTG CAGATAAACA GCTTGCTGAT AAAGCGACTG TATTTATGAC CATGATGCGT GCAACCATGT CGATGTCTTG GGTGATTGGG CCACCCGTAG CCTTTTTAAT CAATGATGCT TTCGGGTTTA AACAAACCTT TCTGCTGGCA GGATTTTTTG CTGTGGTCGT CTTAATTATT GTTTGTGTGG GGATATCTAA TGTGCAGATT GAAAAGGTCA AGTCTGCTCC AAAAAATGTG AATTGGTCAA AGATATCTGG CGTTTTATTC TTTTTGATCT GTATCTTTTT TATCTTTACT GCCAACAATA TGTACATTAC ATCAATCAGC CTTTATATCA CTCAAGCGTT AGATTTTGAT TCTAAATGGG TGGGTTACCT GATGGGCACG GCGGCCTTTG TGGAAATTCC AATAATGTTA GGCGCAGGCT ATCTTGCGCC AAGGTTCGGT GCAACGCGAC TGATCAATAT TGCGATTATT AGCGGCCTGC TATTTTTTGC GGGTTTGCTG GTTGCAGAGC AGCTCTGGCA GTTTATATTG CTGCAGCTGT TTAACGGTGT TTTTATTGGT ATCAATGCCA GTTTAGGCAT GCTGGTTGTA CAGGATATGA TGAAAAAGCA GATAGGGTTA GCCTCAACAT TGTTTAATAA CAGCCTCCTA CTGAGCGTTT TATTAAGCAG CCTTCTCGTG GGGGGAATCG CACAATATTT CAGTTATTAT GCGGTATTTG TTGTCTCCGC CCTATTTTGT TTAATTGCCC TGTTTTTTAT GCGGTTAGCA GAAAGGCAAT GCTTGTCTGT AAAGCCTGAA GGCTTAACGC CTGAAGGCCT TAAAGCCGGA ACGATGTAA
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Protein sequence | MFFSKQSITY LLTCFFIGLS TAFIYPLLSL YLIEEVHATP ISMGILITCM VLSGVLVSQY IAKKSDQGLS RKYIILAGQV GFIITTIFLA MSQHYYTLLF AVVFFMPFSA ACLPQIFSMG RHFADKQLAD KATVFMTMMR ATMSMSWVIG PPVAFLINDA FGFKQTFLLA GFFAVVVLII VCVGISNVQI EKVKSAPKNV NWSKISGVLF FLICIFFIFT ANNMYITSIS LYITQALDFD SKWVGYLMGT AAFVEIPIML GAGYLAPRFG ATRLINIAII SGLLFFAGLL VAEQLWQFIL LQLFNGVFIG INASLGMLVV QDMMKKQIGL ASTLFNNSLL LSVLLSSLLV GGIAQYFSYY AVFVVSALFC LIALFFMRLA ERQCLSVKPE GLTPEGLKAG TM
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