Gene Ping_2508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2508 
Symbol 
ID4626597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3064716 
End bp3065780 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content42% 
IMG OID639797634 
Producthypothetical protein 
Protein accessionYP_943828 
Protein GI119946148 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3934] Endo-beta-mannanase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.321181 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATGGT CGAAAGAGCG TGCTTGGGAA TGGCAAGCAC AACACGGTTG GCTGAGAGGA 
TTTAACTATC TTCCGAGGAC GGCTGTAAAT TGGACTGAAA TGTGGCAAGC GGAAACTTTT
GAGCCGGCAG TTATGGAACA AGAAATTGAG TGGGCTCATA ATGTCGGCTA TAACACCTTG
CGGACGACGG TACCTTTTAT TGTTTGGAAA GCTGAACGTA ATGGCTTACA TAAACGCATT
GAACGTTTCT TGGATATCTG TCAGCGCTTT CATATGAAGG TGATGTTAAC ACCAATGGAT
GATTGTGCTT TCTCCGGTGA TCACCCCTAC CTTGGCCCTC AAAAAGTATC TGTATCAGGT
CTTCATAACA GCCAAGCTGC TGCCACACCA GGTCGAAACA TTGTGATGGA TAAATCACAG
TGGCACGATG TTGAAGCGTA TCTACGTGAC ATTATTTCTA CTTATAAAAA TGATGAGCGG
ATCATCATTT GGGATCTCTA TAACGAACCC ACTAACCGTA TGATTTTCTC AACAGAAGGA
GAATTAGCTT TCGATGATGA GATGGAAGAG TTTAGTCATG AATTGATGGA GAAAGCATTT
GAGTGGGCGA GAGAAATCAA CCCGAGTCAG CCATTAACTG TAGGGGCTTG GCATGCACCT
AGCATCTTAG ATCGCTCCTT ACCACTTTAT GAACACAAAA CAGATTTGCG TGCATTGGAA
CTATCTGATG TTATCTCTTT TCATGCCTAC CTGCCTTTAG ATCTATTTTA TAAAGCCATT
GAGAAGGTGG AAGTGTACCA AAGGCCGATG CTGTGCACTG AATGGCTTGC TCGCCATGCT
GAATCCTTGA TGCATGAACA GTTGCCTATC TTTCATAAAC TTAATATCGG ATGTTACCAA
TGGGGATTAG TGAAAGGTAA AACACAGACT TATTTACCTT GGCCTGCAAT CAAATCTGAT
GATCCGAATT TTAGCACGAA GTGGTTTCAT GATTTATTCG ATGAAAATGG TCAAGCATAC
GATCAATCTG AAATCGACCT GCTCAAAAAA CTCACAAAAA AATAA
 
Protein sequence
MKWSKERAWE WQAQHGWLRG FNYLPRTAVN WTEMWQAETF EPAVMEQEIE WAHNVGYNTL 
RTTVPFIVWK AERNGLHKRI ERFLDICQRF HMKVMLTPMD DCAFSGDHPY LGPQKVSVSG
LHNSQAAATP GRNIVMDKSQ WHDVEAYLRD IISTYKNDER IIIWDLYNEP TNRMIFSTEG
ELAFDDEMEE FSHELMEKAF EWAREINPSQ PLTVGAWHAP SILDRSLPLY EHKTDLRALE
LSDVISFHAY LPLDLFYKAI EKVEVYQRPM LCTEWLARHA ESLMHEQLPI FHKLNIGCYQ
WGLVKGKTQT YLPWPAIKSD DPNFSTKWFH DLFDENGQAY DQSEIDLLKK LTKK