Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_2507 |
Symbol | |
ID | 4626596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 3063471 |
End bp | 3064487 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 639797633 |
Product | transcriptional regulator, periplasmic binding protein of LacI family protein |
Protein accession | YP_943827 |
Protein GI | 119946147 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.445797 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.20531 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAA ATAAAAAAAT TACAATGAGT GACATCGCCA CAGCTGCGGG GGTCTCGCAA TCGACAGTTT CACTGGTATT GAATCGCTCT CAATCAATCA AAATTGCCGA GTCAACCAAG CAGAAGGTGT TGGAAACGGC AGATTCACTT GGTTATAGCA ATAGGAAAGT GACTCACGCA TTGGGCAGAA CCCAAAAAAT TGCCATGGTG ATTAACGGTC TAACCAACTA CGATCCCTTT ATTGACGCCA TCAACGCGGC GCGAGAGGAA GCTTGGTCTA ATGACTACAT TCTGATCACT TTCAACTATG GCAATGATGC TGAGTTAGCC CATAAGATAG AAGCAGAAGT GAACAGTGGT GAATATGTAG GACTTATTTA TGCGTCCAGC ATGACACGTG CACTCAAACA GCAAAAAGTT AACAGCAGCC TGCCAACCGT CTTGCTTAAT TGCACTAACG AAGATGCTCC TGAGGCTCAA TCTATTCTGC CGGCTGATAC GATTGGTGCT TATAAAGCAG TTTTTCATCT TACATCTCAA GGGTATCGAC GTATTGCGAT GCTGACAGGT GAAAGCTGGA TGTTGGCAAC AAGCAAGCGA GTCAGTGGAT ACCGTCAGGC GTTGATTGAT GCGGATATTA TTCCAAAAGA CCATTATATT CTTGAGGCAA ACTGGTCTCT AAAAGAAGCT CATCAACAAA CCCTTAAGTT ACTGGAACTT GCCACTCCAC CAGAAGCTAT TTTCTGTGGC AGTGACTATA TGGCAATGGG CTGCTACCAG GCGATTGCAG AGAAAGGACT CAAAATTCCG CAAGATATTG CTGTAGTAGG GTATGATAAT CAACCGATTG CTTCTGAGAT TTTTCCTGCA TTGACCTCGG TGGAATTACC TTATTCTGTC ATGGGTAAGG AAGCTATTCA GTCAATTGTC GCGCGGATTG CGCATCAACC GTTGCTTTGT ATGCAAAGAA AGATTGAAGG TGAATTGATT GTACGTTCCT CTTCAATAAA AAAATAA
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Protein sequence | MKKNKKITMS DIATAAGVSQ STVSLVLNRS QSIKIAESTK QKVLETADSL GYSNRKVTHA LGRTQKIAMV INGLTNYDPF IDAINAAREE AWSNDYILIT FNYGNDAELA HKIEAEVNSG EYVGLIYASS MTRALKQQKV NSSLPTVLLN CTNEDAPEAQ SILPADTIGA YKAVFHLTSQ GYRRIAMLTG ESWMLATSKR VSGYRQALID ADIIPKDHYI LEANWSLKEA HQQTLKLLEL ATPPEAIFCG SDYMAMGCYQ AIAEKGLKIP QDIAVVGYDN QPIASEIFPA LTSVELPYSV MGKEAIQSIV ARIAHQPLLC MQRKIEGELI VRSSSIKK
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