Gene Ping_2507 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2507 
Symbol 
ID4626596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3063471 
End bp3064487 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content43% 
IMG OID639797633 
Producttranscriptional regulator, periplasmic binding protein of LacI family protein 
Protein accessionYP_943827 
Protein GI119946147 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.445797 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.20531 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA ATAAAAAAAT TACAATGAGT GACATCGCCA CAGCTGCGGG GGTCTCGCAA 
TCGACAGTTT CACTGGTATT GAATCGCTCT CAATCAATCA AAATTGCCGA GTCAACCAAG
CAGAAGGTGT TGGAAACGGC AGATTCACTT GGTTATAGCA ATAGGAAAGT GACTCACGCA
TTGGGCAGAA CCCAAAAAAT TGCCATGGTG ATTAACGGTC TAACCAACTA CGATCCCTTT
ATTGACGCCA TCAACGCGGC GCGAGAGGAA GCTTGGTCTA ATGACTACAT TCTGATCACT
TTCAACTATG GCAATGATGC TGAGTTAGCC CATAAGATAG AAGCAGAAGT GAACAGTGGT
GAATATGTAG GACTTATTTA TGCGTCCAGC ATGACACGTG CACTCAAACA GCAAAAAGTT
AACAGCAGCC TGCCAACCGT CTTGCTTAAT TGCACTAACG AAGATGCTCC TGAGGCTCAA
TCTATTCTGC CGGCTGATAC GATTGGTGCT TATAAAGCAG TTTTTCATCT TACATCTCAA
GGGTATCGAC GTATTGCGAT GCTGACAGGT GAAAGCTGGA TGTTGGCAAC AAGCAAGCGA
GTCAGTGGAT ACCGTCAGGC GTTGATTGAT GCGGATATTA TTCCAAAAGA CCATTATATT
CTTGAGGCAA ACTGGTCTCT AAAAGAAGCT CATCAACAAA CCCTTAAGTT ACTGGAACTT
GCCACTCCAC CAGAAGCTAT TTTCTGTGGC AGTGACTATA TGGCAATGGG CTGCTACCAG
GCGATTGCAG AGAAAGGACT CAAAATTCCG CAAGATATTG CTGTAGTAGG GTATGATAAT
CAACCGATTG CTTCTGAGAT TTTTCCTGCA TTGACCTCGG TGGAATTACC TTATTCTGTC
ATGGGTAAGG AAGCTATTCA GTCAATTGTC GCGCGGATTG CGCATCAACC GTTGCTTTGT
ATGCAAAGAA AGATTGAAGG TGAATTGATT GTACGTTCCT CTTCAATAAA AAAATAA
 
Protein sequence
MKKNKKITMS DIATAAGVSQ STVSLVLNRS QSIKIAESTK QKVLETADSL GYSNRKVTHA 
LGRTQKIAMV INGLTNYDPF IDAINAAREE AWSNDYILIT FNYGNDAELA HKIEAEVNSG
EYVGLIYASS MTRALKQQKV NSSLPTVLLN CTNEDAPEAQ SILPADTIGA YKAVFHLTSQ
GYRRIAMLTG ESWMLATSKR VSGYRQALID ADIIPKDHYI LEANWSLKEA HQQTLKLLEL
ATPPEAIFCG SDYMAMGCYQ AIAEKGLKIP QDIAVVGYDN QPIASEIFPA LTSVELPYSV
MGKEAIQSIV ARIAHQPLLC MQRKIEGELI VRSSSIKK