Gene Ping_2506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2506 
SymbolgalM 
ID4626595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3062209 
End bp3063276 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content40% 
IMG OID639797632 
Productaldose 1-epimerase 
Protein accessionYP_943826 
Protein GI119946146 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2017] Galactose mutarotase and related enzymes 
TIGRFAM ID[TIGR02636] galactose mutarotase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.288802 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.200846 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACAAG CAAACTTCTT ATTAATCCAA AGCTCCATGA CTAAAACCAA TGCGATTGAT 
GGTAAACCAG CAAAGCTTTT ACATTTAACA AACCAACATG GCATGACCGC TACTTTCATG
GATATAGGCG CAACATGGTT AAGCTGTACG TTACCAGTCA ATAAAGAACA TCGGGAAATC
CTACTCCGCT CGCTGAACAT GGAAGAACAC ATAAAACAAA CGGCATATTT TGGTTCTGTC
GTTGGACGCT ACGCAAATCG TATCAGTAGA GGAAAATTTT CGATCAATTC AAAACCGTAT
AAAATTACCA TTAACGATGG TGACAACTCT CTGCATGGTG GTGTAAACGG ATTTGATAAA
CGTCGTTGGA CCATCGAATC GTCGAGAGAA AATAGCGTCA CCTTTTCTCT ATATTCAAAA
GATGGTGATC AAGGTTACCC AGCTAATTTA CAAGTGAAAG TCACCTATAC CTTGACCAAT
GACAATGAGC TTGTGATCGA TTATTTTGCC AAGTCGGATA GCAATTGCCC TGTAAACTTA
ACCAATCACG CTTATTTCAA TTTGGCTGGT GAGCAATCTA ACGCGAAAAG CTTAGATCAC
ACCCTACAGA TGCACGCAGA TCACTACTTG CCAACACATG ATGACTTAAT TCCTACAGGG
GAATTACGAG CAGTGAAATC TACCAGTTTT GATTTCAATC AAGAGAAAAA AATTGGAGCA
GAATTTCTTT CTGAACAAGA TCAAAAAATC GCGGGAGGCT ATGACCATGC TTTTATTTTT
AATAAGAAAT TAACCAATGG TGAAGCAACA GTTGTTACCT TAACTTCACC AGAAAAAGAG
GTGAGCATGC GAGTTTCAAC TACCAAGCCT GCGATCCAAT TCTATTCAGG AAACTTTCTT
GCCGAGACGC CCGGGGCATC AAAAATTTAC CAAAATTATG ACGGGCTAGC GTTAGAAACT
CAATACTTAC CAGATGGTCC AAACCATTCT GAATGGGGAG AGAGTAGCGG TATTTTAAGT
GCTGAAGCGA CATATCAGCA CCAAACTACC TATCAGTTTG AGTTCTAA
 
Protein sequence
MSQANFLLIQ SSMTKTNAID GKPAKLLHLT NQHGMTATFM DIGATWLSCT LPVNKEHREI 
LLRSLNMEEH IKQTAYFGSV VGRYANRISR GKFSINSKPY KITINDGDNS LHGGVNGFDK
RRWTIESSRE NSVTFSLYSK DGDQGYPANL QVKVTYTLTN DNELVIDYFA KSDSNCPVNL
TNHAYFNLAG EQSNAKSLDH TLQMHADHYL PTHDDLIPTG ELRAVKSTSF DFNQEKKIGA
EFLSEQDQKI AGGYDHAFIF NKKLTNGEAT VVTLTSPEKE VSMRVSTTKP AIQFYSGNFL
AETPGASKIY QNYDGLALET QYLPDGPNHS EWGESSGILS AEATYQHQTT YQFEF