Gene Ping_2458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2458 
Symbol 
ID4627140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3006733 
End bp3008187 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content38% 
IMG OID639797593 
ProductRimK domain-containing protein ATP-grasp 
Protein accessionYP_943788 
Protein GI119946108 
COG category[H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.133162 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.304759 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAAAAG CCACACAAAA ATCGTTGCCT AAAATTGGTT TATTATATTT AGACCATGTC 
TTACGGTTTT TTGATAAATC AAATTTTAAA GGTTGGCCTG ATAAAATAGA AAGCGTTGTT
TACCATTGGC GAAATGATAA ACAACGCTTT ATCAAAGAAG TTAAACGAAA GAACATTGAA
GTATTAATTG GTAACGTACC CGCAACGGCA TATGAAACCT TTAGAGAAAT ATCTCGTGCA
TTGCCTAATG TACAGTTTAT ACCTTCACTA GATACTCAGT TTGCTAATAA ATCTAAGGAA
AATGTTACCC AACTTTGTGA AAAATATAAT ATTCCTATTC CTAAAACAAA AATATTTTAT
GAACCCTCAG AAGTAGAGCC GTTTTTTAAA AAAACGGTTT ATCCTAAAAT TATTAAAAAA
TCCTATGGCC CTTCTAATTA TGGCGGATAT TTTGTTCATA AAGTAGATAG TTACCAAGAG
GCCACCGCAT TACTCAGTAA GAAAAAATAT TATCCCGTTT ATACACAAGA TTTTGTCCCT
ATGGCCGCTG ATATCCGCGT GATGTTAATT GGTCATAAAC CTGTTTGTGC TTTTTGGCGC
AGACCACCTG CAGGCGAATG GTTAACCAAT ACCAGTCAAG GTGGCAGCAT GGACTATATG
AAGGTACCTC AAGCAGTCTT AGATCTTGCG GTTAGCGTGT CTAAAGTTGC AAATGCTGAA
TACTGGGCCT GTGATGTTGC AGTGGGAGTC GATGGAAAAT ATCGCATTTT AGAATGTGCA
ACTGCTTTTG CTGCCTTTCC TTATATTCGT GATTGGATTG GTCAGTATTT AATGTGGAAA
TTTTCCGCAG GTCAATTTCA TCAACCTCAT ATTCCCCTCT ATAACTGGGA AGAATTGTGT
AAAATTAGCG CTCATGTTTT ACGTACTATG CGCTATATCA CTTTTGGACG AGAAGTCTCT
CCAAGTTGCG ATAGCGGTGA AATGTTTACG GCACAGAATG ATGATAATTA CCCGATCATC
AATACCATTG ACGGTAAGCA GGAAGAATGG CCGAGTGAAG TCTGGAACCG GCAAGATAAC
TACTGCAGGC GCGAAACTAA CAGGCAAGTC GCAACAAAGA CTAAGCTTGC CGATGAATGT
TCCTTTCTAA ATAAATCCAG TAATGCCCCC TCAAGTGAAG ATAGTGATGA ATCTCCGGCA
CTTAATCCGC CACTTAAAAA TATCGAATCA ATTTTAACCA TGACGGTTGA TGATATTGAA
TTTTTTTTAA TGGGCATTAA CGGCATAGGT AAAAAACACA CTGAGCTCAT TCTTCAAACC
CTTGGTGTTG AAAGTACTTA TAACAGCTTG CAGGGTGACG GCAGTCATTT TTATCAAGTG
AAAAATATAA AAGAGAAAAA AGTGGCCAGG ATCATGGAAG CTTGGCAAGT ATTTAAGCTG
AAGTTTAATT ATTAG
 
Protein sequence
MKKATQKSLP KIGLLYLDHV LRFFDKSNFK GWPDKIESVV YHWRNDKQRF IKEVKRKNIE 
VLIGNVPATA YETFREISRA LPNVQFIPSL DTQFANKSKE NVTQLCEKYN IPIPKTKIFY
EPSEVEPFFK KTVYPKIIKK SYGPSNYGGY FVHKVDSYQE ATALLSKKKY YPVYTQDFVP
MAADIRVMLI GHKPVCAFWR RPPAGEWLTN TSQGGSMDYM KVPQAVLDLA VSVSKVANAE
YWACDVAVGV DGKYRILECA TAFAAFPYIR DWIGQYLMWK FSAGQFHQPH IPLYNWEELC
KISAHVLRTM RYITFGREVS PSCDSGEMFT AQNDDNYPII NTIDGKQEEW PSEVWNRQDN
YCRRETNRQV ATKTKLADEC SFLNKSSNAP SSEDSDESPA LNPPLKNIES ILTMTVDDIE
FFLMGINGIG KKHTELILQT LGVESTYNSL QGDGSHFYQV KNIKEKKVAR IMEAWQVFKL
KFNY