Gene Ping_2426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2426 
Symbol 
ID4625972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2974600 
End bp2975796 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content47% 
IMG OID639797562 
Productamidase 
Protein accessionYP_943757 
Protein GI119946077 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.771538 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.022495 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGGAT TGATAGATAA GGACAGCCGT GTTTATTGCC GGCAGGGGCC GCAAAGGCTA 
TTGCCCATTA GCGAGGGTTT ACTGTCGGGT TATACTTTTG TTTTTAAAGA TTTGTTTGAT
GTCAAAGGTT ATGTTACCGG CGCGGGTAAT CCGACCTGGC TTGAGACTCA CAATATGGCA
GAGCAAACAT CGCCACTGAT TTTAGCGCTG TTAAGTCAAG GAGCAAATTG CGTTGGGCGA
GTACAAAGTG ATGAGCTTGC TTATAGTTTA AATGGTCAAA ATATTCATTA CGGTACTCCT
GTTAATCCTA TCGCGCCGAA TTGTCTTCCG GGTGGATCAT CCAGTGGCAG TGCCGTAGCT
GTTGCCAGTA AGGATGCTGA TTTTTCTATT GGCACCGATA CCGGTGGTTC GGTTCGTGTA
CCCGCCAGTT ACTGCGGGTT ATATGGTTTA AGGCCGACCT TGGCAAAGTT TAATCTTGAG
CACTGTTTTG AGCTGGCAAA GAGCTTTGAT ACTGCGGGTA TCTTTACGCG AGATCTGGAT
TTAATGCATA AAGTATTCGA GGTGCTTAAT GGCGCACCGG TTAAGGGGGA ATCTGCCCAA
ACTCTTTATC TGGATAAGAC TCTGGCAGCG CAGCTTAGTG ATCAGCGTTT AAAGCGTTTA
CAAGTTTGCT GCATTGAGGC TGGGATCACC CTGCTTAATG GTGATTTTCT GGCTAAGTAT
CATCTTAGCC TTGAAGCCAT CAGTTTGTTA TTTCGCACTG TTCAGGGTTA TGAAATCATT
GCAAAGCATC GCGAGTGGTT AGCTGAGTTC GGACACAGTT TAGAGCCTTC TATTTACCAA
CGGGTGGAAT GGTCACGCAC GATCAGTGCA GAGCAATATA CCCAGGCTAA AAAACGTCAA
ACAGATTTCA GGCTGCAACT GACCGTTCTG CTTCAGCAGC AAGGGGGGTT GTGGTTAGTG
CCAACAACAC CTTCAGGGCC ACCAAGCCTC TCTCTTGCAG GCGATCAGCT GGCCAAGTAT
CGATCGAACT TAATGGGACT CACCAGTATT GCAGGGCTGA GCGGTTTCCC GCAACTGCAT
CTGCCTATCA AGGGCCTAGA AGAAGGGCCC TGCGGAATAT CACTGTTAGG TCTGCCGGAC
AGTGAAGGAG ATCTGTTCGC TACCGCGCAA CAGTTAATTC AAGGAAAACA ATTATGA
 
Protein sequence
MNGLIDKDSR VYCRQGPQRL LPISEGLLSG YTFVFKDLFD VKGYVTGAGN PTWLETHNMA 
EQTSPLILAL LSQGANCVGR VQSDELAYSL NGQNIHYGTP VNPIAPNCLP GGSSSGSAVA
VASKDADFSI GTDTGGSVRV PASYCGLYGL RPTLAKFNLE HCFELAKSFD TAGIFTRDLD
LMHKVFEVLN GAPVKGESAQ TLYLDKTLAA QLSDQRLKRL QVCCIEAGIT LLNGDFLAKY
HLSLEAISLL FRTVQGYEII AKHREWLAEF GHSLEPSIYQ RVEWSRTISA EQYTQAKKRQ
TDFRLQLTVL LQQQGGLWLV PTTPSGPPSL SLAGDQLAKY RSNLMGLTSI AGLSGFPQLH
LPIKGLEEGP CGISLLGLPD SEGDLFATAQ QLIQGKQL