Gene Ping_2390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2390 
Symbol 
ID4624043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2908057 
End bp2909388 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content45% 
IMG OID639797527 
ProductGTP-binding protein, HSR1-related 
Protein accessionYP_943725 
Protein GI119946045 
COG category[R] General function prediction only 
COG ID[COG2262] GTPases 
TIGRFAM ID[TIGR03156] GTP-binding protein HflX 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.817457 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATTC CAACAACAGA AAAATCAGTC ACCCGCGCCC TATTAATTTC TATTCGCACA 
CCTGATGTCA GCCTGCAGGA AGTGGAGGAA TCATTAGCTG AATTAAGCCG TTTAGTGAGC
ACCTTAGGTT TTTCTGTGGT AGCGACTAAA ACGCAGCGAC AAAGATCGAC CAAACAGCTG
TCAGTATTGG GCTCCGGAAA ACTGGAAGAA TTAGCCGAAT TAACCAGTGA GTCTGAAGAT
CAATCGCAGT TAGACTTTAA CCCGGATGAA TTAAGCGCAT TAATAGCCGC AGGCGACATT
CAGGAACAGG CAAATGTGGC GGTCTTTGAT TGCGAACTGA GCCCCAATCA AATACGCCAT
GTTGAAGCGG CATTAGGGGT AGAGGTTTAC GATCGTACCC GCGTGATTAT TGAAATCTTT
AGTAAACACG CACGGACCCG CACCGCTAAA CTACAGGTAG AAATAGCGCG ACTTAATTAC
TTAACACCCA GATTACGTGA TGAAAACAGT GGCGATCGCG AACGTCAAAA AGGCAGTTGG
ATAGGTGAAA GTGCCTTTGA AATTAACAGT CGCCGTATTC GCGATAAAAT AGCCGATCTA
AAACGTGAGA TAAAAAAACT GCAGGAAGAG ATGCAGGGCA GGCGCAGTAG TCGTGTCGAG
CAATTGTGTG TGGCGTTAGT GGGTTATACC AATGCCGGAA AATCATCTTT AATGCGCGCC
CTGACGGACT CGGAAGTGTT AGTTGAAGAT AAATTATTTG CCACCTTAGA TACCACAGTA
CGTACCCTGC AGCCGCCAAC ACAGCCGCGA ATTTTAATAT CAGACACCGT GGGTTTTATC
AAAAAGCTGC CCCATGATTT AGTGGCCTCA TTTCATTCAA CTCTGGAAGA AGCAAAAGAT
GCGGATTTAT TGCTTTATGT GGTCGATGCC TCGGATGAAA ACTTCACGGC TCAATTAGCC
GTTGTTGATC ATGTATTAGC AGAGTTAAAT GTCGATGCCA GCAACAGACT ATTATTACTG
AATAAGGTCG ATTGTATCAG TGAAGAGCGC CAATTAGCGC TGCTAGAGCA ATACCCCGAT
GCGCTGCAAA TTAGTGCGCG CAATAAAGGT GATGTCGCCC TGGTACATCA GGAAATTCAA
GATTTTCTGG AAAAGAAAAT GTGCCCCGCC TGTTTTCATA TTCCCTACAC TGCCAGTGGG
GTGATGGGCG AAATTCACAG TAAAATGCAG GTAACAGATG AGCAATATCA TGAAGATGGT
ATGCGTATAA CCCTAAAAGC GACCCCGGTT GCCTTGGAGC GACTGCATAA AATGCTGCAA
AGCTCTTTTT AA
 
Protein sequence
MTIPTTEKSV TRALLISIRT PDVSLQEVEE SLAELSRLVS TLGFSVVATK TQRQRSTKQL 
SVLGSGKLEE LAELTSESED QSQLDFNPDE LSALIAAGDI QEQANVAVFD CELSPNQIRH
VEAALGVEVY DRTRVIIEIF SKHARTRTAK LQVEIARLNY LTPRLRDENS GDRERQKGSW
IGESAFEINS RRIRDKIADL KREIKKLQEE MQGRRSSRVE QLCVALVGYT NAGKSSLMRA
LTDSEVLVED KLFATLDTTV RTLQPPTQPR ILISDTVGFI KKLPHDLVAS FHSTLEEAKD
ADLLLYVVDA SDENFTAQLA VVDHVLAELN VDASNRLLLL NKVDCISEER QLALLEQYPD
ALQISARNKG DVALVHQEIQ DFLEKKMCPA CFHIPYTASG VMGEIHSKMQ VTDEQYHEDG
MRITLKATPV ALERLHKMLQ SSF