| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_2223 |
|---|
| Symbol | |
|---|
| ID | 4624401 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 2704242 |
|---|
| End bp | 2706914 |
|---|
| Gene Length | 2673 bp |
|---|
| Protein Length | 890 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 639797361 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_943563 |
|---|
| Protein GI | 119945883 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3008] Paraquat-inducible protein B |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.280111 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.190601 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAAC AAGATTCAAT GACAGAGGCA ACAATCCTCA AGTCACAAAC AATATCGCCC
ATCTGGTTTC TTCCTGCAGT TGCTGCACTT TTGGGTGCCT GGTTTTTATT TCAAAATATA
ACCCATGCTA ATACGACCAT TAAAATACAC TTTGAACATG CGGAAAGCAT CATAGTTGAT
AAAACGAAAC TGCATTACAA AGGCGTGATC ATTGGTACTG TCAAAAAAGT GGAGTTGGAT
GCCACCAGCG GTGTGAATAT TATTGCAGAA ATTGAATCTC ACGCCAAATT TATGCTCCGT
AAGAACACCA AATTTTGGTT GGTTTCACCC AAAGCGTCAC TCACTTCCAT AACCGGTTTA
GATACCCTTT TTTCTGGTAG TTATATTAAT CTGCAACGTG GTGAAGGGGA GTATACAACT
AATTTTATAG CACAAACAGA GCAGCCCATT AACATTCCTG AAAACGCACG GCTCATTAAT
CTACAAAGTG ACAATGCGGA TTCTATTAAT GTCGGGACAC CATTATTCTA CAGGAATATT
AAAGTGGGTG AAGTTGCCGC GATCCGTTTA GAGCAATCAG GAAAAACTGT CAATATTAGC
GCATTTGTTG ATGGTGAATA TAAACATCTG GTTAAAAATA ACAGTAAATT TTGGAATATT
AGCGGGTTAA GCGCCAATGT CTCACCAGCA GGTATCGATA TATCCCTCAA TAGCATCACT
TCCTTAATTG CAGGCGGTAT TACCTTTTCC TCACCTGAGG ACGGTGAAAC ACTTAAAAAC
GAGGCTCAAT TTCAATTATT TAATAATATT GATGACAGTA AAACAGGGCT CTCTATAGAG
CTAATTACAA ATAAAATCAA TAACTTACCA AATGGCGCCG GCATTTTATT TAAAGGTTTT
GGTATTGGCA GAATAACGGA TATTCAATAT TCTATAAAGG ATCAGCAGTT TGTTGTCTCG
GCGCTTATTA ACCCTCAGTT TAGTGAATTG ATCACTGACG GATCACAATT TTGGATTGAG
CAGACATCAT TCACCTTTGC AAAAATAAAA AATATTGGCA ATGTCATTAA AGGGGATTAT
ATTGCTTTTC AACCCGTTGA AAAAAACCAA TTAAGCCACC GTAAAAAATC CACACGTTTT
CTTATTCAGC AGGCAGCGCC CGCGAAAGCT TCGGTCCTTT CTCTGCTGGT ATTAACCGAA
GATGCTACCG GACTAAACCC GGAAGCCCCC ATTACTTATC AAGGGCTAAA AATAGGGAAA
ATAACGGCTT TAGATTTTTC AGAAAAGGCT GGGTTTATCG CGGTCCACAT TGATATTGAC
CAGCAGTATC ACTATCTAAT TAATAAAAAC AGCCAATTTT ATCTGCTCAA CGGGGTAAAT
TTCAACGCGT CATTAAAAGG GATAGAGGTT CAATCTACCC CCCTTGAAAA TTTAATTTCT
GGTGGCATAG GCTTGTATAA TAAAAAACCG GTTAATCAAT CACACACGGT TGCATTTTTA
AATAAAGATC AACTATTTAG ATTATACCCC TCAAAGGCAC TAGTAAAAAT GGGCCTTAAT
GTTTTCAGCC AACCTGGCAT TGTTCACCTT TTAAGCAGAG AATTACCCTC TGTGAGCGAA
GGCTCTCCAG TTTATTATAG AAAATTGCCG ATTGGCGAAG TGAGTGGTTT TTCTATTGAT
AATTCAGGTT TAATGCAGAC CACCCTCAGC ATTAAAGGAC AATATAAACA TCTTATCAAT
GATCAGAGTG TCTTTTGGAA CATCAGTGGT TTTAGTGCGG AAGCCGGTCT TAGCGGTTTG
AAAATACAAG CCGAGTCTTT ATTAGCCATT GCCGCAGGCG GAATTGCGGT GGGTCCGGGC
CATCGGGAGA TCGACAATAA ACACAGTAAT GGTAAATACA AACTTTTTAA TAACCAGAAA
CAGGCAACCA CCCCCACGAC TTTAATCAGT TTAACCTTTA ATCAAGCAAA GGATTTACAA
ACAGGCAGCC CGTTACGCCT TAAAGGATTA GTTGTTGGTG AGGTTACTAA TTTAACACTC
ACATCACAAC AGAAAGTGCA GGCAACGGTC AATCTTAAAC CCGAATTTGC CAAGCAGGTG
GCACGCAAAG GTAGCCGGTT TTGGATGGTA ACGAGTACAG CGAGCTTATC GGGTGTTAAA
AATTTATCAA CCTTAGTGAC CGGGGCCTAT ATTAATGTCT CCCCTGGTGA AGGGATCTCT
GAAAAACATT TTAGCGGTGA AGACTCCGAG CCACTTATTG GACCCAATCA ATCCGGATTA
CGCCTTATTT TGGTTGCAGA TAATGCCGGC TCTAGTGACA TAAGCAGCCC TGTCTATCAC
CGCCAAATCC AGATAGGACA AGTAATTTCA AAACGCTTAT CCTATAATTC TTCAGGGGTA
GAAATCACCG TTAACATAAC CCCCAAATAT GCCCATTTAA TTCGTCAAAA TTCTATTTTT
TGGCCTGCTT CTGGATTTAA CTTAGAGTTT GGTATCACAG GTGCCGCCTT AAAAGCGACC
TCTTTAACCT CTTTAATTAA GGGAGGGATA AGTATGAGTA CGCCAGATAA CCAACCGTTA
CAACCTGCAA GCGATCCATT GTCTCGTTTT CAGCTAGAAA ATGAAATCCA GGAAGAATGG
TTAAATTGGA GATTAGCTAT CCCTAGACCT TAG
|
|---|
| Protein sequence | MNEQDSMTEA TILKSQTISP IWFLPAVAAL LGAWFLFQNI THANTTIKIH FEHAESIIVD
KTKLHYKGVI IGTVKKVELD ATSGVNIIAE IESHAKFMLR KNTKFWLVSP KASLTSITGL
DTLFSGSYIN LQRGEGEYTT NFIAQTEQPI NIPENARLIN LQSDNADSIN VGTPLFYRNI
KVGEVAAIRL EQSGKTVNIS AFVDGEYKHL VKNNSKFWNI SGLSANVSPA GIDISLNSIT
SLIAGGITFS SPEDGETLKN EAQFQLFNNI DDSKTGLSIE LITNKINNLP NGAGILFKGF
GIGRITDIQY SIKDQQFVVS ALINPQFSEL ITDGSQFWIE QTSFTFAKIK NIGNVIKGDY
IAFQPVEKNQ LSHRKKSTRF LIQQAAPAKA SVLSLLVLTE DATGLNPEAP ITYQGLKIGK
ITALDFSEKA GFIAVHIDID QQYHYLINKN SQFYLLNGVN FNASLKGIEV QSTPLENLIS
GGIGLYNKKP VNQSHTVAFL NKDQLFRLYP SKALVKMGLN VFSQPGIVHL LSRELPSVSE
GSPVYYRKLP IGEVSGFSID NSGLMQTTLS IKGQYKHLIN DQSVFWNISG FSAEAGLSGL
KIQAESLLAI AAGGIAVGPG HREIDNKHSN GKYKLFNNQK QATTPTTLIS LTFNQAKDLQ
TGSPLRLKGL VVGEVTNLTL TSQQKVQATV NLKPEFAKQV ARKGSRFWMV TSTASLSGVK
NLSTLVTGAY INVSPGEGIS EKHFSGEDSE PLIGPNQSGL RLILVADNAG SSDISSPVYH
RQIQIGQVIS KRLSYNSSGV EITVNITPKY AHLIRQNSIF WPASGFNLEF GITGAALKAT
SLTSLIKGGI SMSTPDNQPL QPASDPLSRF QLENEIQEEW LNWRLAIPRP
|
|---|
| |