Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_2210 |
Symbol | |
ID | 4623847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 2692387 |
End bp | 2693304 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 639797348 |
Product | lipoprotein NlpI |
Protein accession | YP_943550 |
Protein GI | 119945870 |
COG category | [R] General function prediction only |
COG ID | [COG4785] Lipoprotein NlpI, contains TPR repeats |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.72202 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.227961 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGATTTC ATTGTTCATT ATTGTTCGTT TTACCTATTT TATTTACATT AACAGCTTGC CAAAGCCTTC CTAATACTGA GCAGGATTTT TCAACGCAAA ATAATGTAAT TAATAAATTC CCTCTCTCTA CAGCTGTGCA AATAGACTAT CAAGATGAAG TTAAATTGTT AAAAATTAAT CAATTACTTG TTGAACAAAA AGATCTGGAT GCAAGACAGT ACGCAGTATT ATTTTATGAA CGTGGGGTTA TTTATGACCG AATGGGCTTG GCAGCACATA GTCGTTATGA TTTTATCCAA GCGTTGAGTG TTGATCCTAC CTTTGCAGAT GCTTATAACT TTTTAGGGCT TTATCTATTA TTATCCGAAT CCTATGATGA GGCATTTGAT GCTTTTGATT CGGCATTAGA GTTATCCGAT AATATGCAAT ACAGTTATTT GCATAGGGCA GTTGGGCTGT ATCAAATCGG ACGTTATCAA TTAGCGATGA ATGATATTGA AAAGTTCTAT TCGCTTGATC AAAATGATCC CTATCGGGTT TTGTGGCGTT TCATTATTAA CAGTAAAGTC GATCAGTTAA AAGCGTTACA GACACTTAAA TCATCAACTC AATTAAGTAA TGATCCTCGC TTTGCCTGGG CAATCGTTGA TGTGATAGCG GGCAGAACAA CAGAAAAAGA TTTTCTTGAA AGTCTCTCTT ATGGTGTTAA CACCAATAAA GAACTTGCTG AGCGTCTATG TGAGGCCTAT TTTTATCTTG CTCATTGGCA TCAATTGTCA GGCCATTTAG AGAAAGCGGT CTATTACTTT AAATTAAGTA CCGCGACAAA TATTCATGAG TTTATTGAAT ATAAGTATGC ATTGATAGAG TTAGGTGCAA TTCAAAGAAG GTTGCAGACT GGTAAAGATA AAAAATAA
|
Protein sequence | MRFHCSLLFV LPILFTLTAC QSLPNTEQDF STQNNVINKF PLSTAVQIDY QDEVKLLKIN QLLVEQKDLD ARQYAVLFYE RGVIYDRMGL AAHSRYDFIQ ALSVDPTFAD AYNFLGLYLL LSESYDEAFD AFDSALELSD NMQYSYLHRA VGLYQIGRYQ LAMNDIEKFY SLDQNDPYRV LWRFIINSKV DQLKALQTLK SSTQLSNDPR FAWAIVDVIA GRTTEKDFLE SLSYGVNTNK ELAERLCEAY FYLAHWHQLS GHLEKAVYYF KLSTATNIHE FIEYKYALIE LGAIQRRLQT GKDKK
|
| |