Gene Ping_2210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2210 
Symbol 
ID4623847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2692387 
End bp2693304 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content35% 
IMG OID639797348 
Productlipoprotein NlpI 
Protein accessionYP_943550 
Protein GI119945870 
COG category[R] General function prediction only 
COG ID[COG4785] Lipoprotein NlpI, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.72202 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.227961 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATTTC ATTGTTCATT ATTGTTCGTT TTACCTATTT TATTTACATT AACAGCTTGC 
CAAAGCCTTC CTAATACTGA GCAGGATTTT TCAACGCAAA ATAATGTAAT TAATAAATTC
CCTCTCTCTA CAGCTGTGCA AATAGACTAT CAAGATGAAG TTAAATTGTT AAAAATTAAT
CAATTACTTG TTGAACAAAA AGATCTGGAT GCAAGACAGT ACGCAGTATT ATTTTATGAA
CGTGGGGTTA TTTATGACCG AATGGGCTTG GCAGCACATA GTCGTTATGA TTTTATCCAA
GCGTTGAGTG TTGATCCTAC CTTTGCAGAT GCTTATAACT TTTTAGGGCT TTATCTATTA
TTATCCGAAT CCTATGATGA GGCATTTGAT GCTTTTGATT CGGCATTAGA GTTATCCGAT
AATATGCAAT ACAGTTATTT GCATAGGGCA GTTGGGCTGT ATCAAATCGG ACGTTATCAA
TTAGCGATGA ATGATATTGA AAAGTTCTAT TCGCTTGATC AAAATGATCC CTATCGGGTT
TTGTGGCGTT TCATTATTAA CAGTAAAGTC GATCAGTTAA AAGCGTTACA GACACTTAAA
TCATCAACTC AATTAAGTAA TGATCCTCGC TTTGCCTGGG CAATCGTTGA TGTGATAGCG
GGCAGAACAA CAGAAAAAGA TTTTCTTGAA AGTCTCTCTT ATGGTGTTAA CACCAATAAA
GAACTTGCTG AGCGTCTATG TGAGGCCTAT TTTTATCTTG CTCATTGGCA TCAATTGTCA
GGCCATTTAG AGAAAGCGGT CTATTACTTT AAATTAAGTA CCGCGACAAA TATTCATGAG
TTTATTGAAT ATAAGTATGC ATTGATAGAG TTAGGTGCAA TTCAAAGAAG GTTGCAGACT
GGTAAAGATA AAAAATAA
 
Protein sequence
MRFHCSLLFV LPILFTLTAC QSLPNTEQDF STQNNVINKF PLSTAVQIDY QDEVKLLKIN 
QLLVEQKDLD ARQYAVLFYE RGVIYDRMGL AAHSRYDFIQ ALSVDPTFAD AYNFLGLYLL
LSESYDEAFD AFDSALELSD NMQYSYLHRA VGLYQIGRYQ LAMNDIEKFY SLDQNDPYRV
LWRFIINSKV DQLKALQTLK SSTQLSNDPR FAWAIVDVIA GRTTEKDFLE SLSYGVNTNK
ELAERLCEAY FYLAHWHQLS GHLEKAVYYF KLSTATNIHE FIEYKYALIE LGAIQRRLQT
GKDKK