Gene Ping_2078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_2078 
Symbol 
ID4624681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2528602 
End bp2528943 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content37% 
IMG OID639797226 
Producttransport-associated 
Protein accessionYP_943428 
Protein GI119945748 
COG category[R] General function prediction only 
COG ID[COG2823] Predicted periplasmic or secreted lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.278114 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.920711 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATA GCCATAAATT GTTAGTGCTA AGTGCGACTC TTATTAGTGC CATAGTCCTT 
ACTGGATGTA ATAATCAAGA AGACATCGCA GCTAAAATAT TACTGCCGAC TAAAATCATC
AGTGAAGTGA ATGATAGTGA TGTGAACATT AGAATTAAAG CAGCACTGTT TGCTGATCAA
GCGCTCAAGT ACCTTGAGAT TAAAGTGCAA ACACATAAAG GCGATGTTTT ACTGACGGGT
GAAGTAGACA GCCAAAACCG GATTGATCAT GTGAATAAAT TAGTGATGAG CATCAAAGGT
GTGCACACGA CTCACAACCA TCTTATTATT AAAACATCAT AA
 
Protein sequence
MKNSHKLLVL SATLISAIVL TGCNNQEDIA AKILLPTKII SEVNDSDVNI RIKAALFADQ 
ALKYLEIKVQ THKGDVLLTG EVDSQNRIDH VNKLVMSIKG VHTTHNHLII KTS