Gene Ping_1892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1892 
Symbol 
ID4624903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2299584 
End bp2300720 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content47% 
IMG OID639797065 
Productlipase, class 3 
Protein accessionYP_943267 
Protein GI119945587 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.184018 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.008794 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCACACA AATTTACTAT GGATCACAGC CTGCTCGAGC CACCGATTAA GCGTGCTGCC 
TACAGTGACC GTACTGCCTG GTTGATGGCC GTCATGTCTT CTCTTGCTTA TATACGCTTC
GAGCAACCGA CACCGCTTGA TGAACTGGCG AAGGTGTTGT CGAGAGAAAC GAACGAGCGC
AATATTCTGA CTAAACTTAA TGCGTTGCTC GCCGCAGAAA ACCGCGACCA GCTCAAAAAA
GAGTTGAAAT CTGATCTTCA AGATATTGGT TTTGAATTGG TCGATACCTA TAATATATCA
ATACCCTTGG TTGTGGACAC TCAGGCATAT TTGGCCAAAA TAACGCTTCA AGACCGCGAT
CCGATGTTGG TTCTTGCCTT TAGGGGCACC GAAGTGACAA ACGCGGCCGA TATTAGATCC
GATGTCTCTG CCAATCCCAT GAATATTGGC CCCAAAGAGG AAGGTCATCA AGTACATTCA
GGCTTCTACA ATGCCTTTAA GGCCGCGCAG TCTGTTATCG AGCTCAGTCT TAATAAACCC
GAACTGAAAA ATATGCCTTT ATATATTACC GGACACAGTT TGGGCGGAGC GCTTGCGGTA
GTTGCAACCT ACTGTATATC AAATGATTCA GTTGGAGCCT GTTATACTTT TGGTGGGCCT
CGTGTTGGTA ATATGCTGTT TGGACAGAGT ATCAGGACGC CGGTCTATCG GGTCATTAAC
GCCGCTGATC TGGTGCCAAG ATTACCGCCC TCTTATTTAA TAGAGGGCAT AACGCTTCTC
CTTAGATGGT TACCGATAAT CCCTTATAAC AACCAAGTTG CAGATTACCT TGAGCGGTTC
CGGCATTATC GGCATTATGG CGATCTGCGT TATCTCACCG ATGCCACACG AAGTACACCA
GAGGGAGAAG GGATGCTGGC TGCATATCCC GGCTTGCAGG TGATTGCCAA TCCATGTCAG
CTAAGTAGAT GGATTTGGCT CTGCAGCAGG CTTATTGCAA CCTATGGACG TGCAGGAATT
AATGATCATA GCATTGACAT TTATGTAGAA AAACTGGCTT ACTGGGGAAT ACAGCGAAAT
CTAGGTAAGC CTAAATTGGT CAGCGCACAA GCAGAAACTA AGGGAAGTAC GCAATAA
 
Protein sequence
MPHKFTMDHS LLEPPIKRAA YSDRTAWLMA VMSSLAYIRF EQPTPLDELA KVLSRETNER 
NILTKLNALL AAENRDQLKK ELKSDLQDIG FELVDTYNIS IPLVVDTQAY LAKITLQDRD
PMLVLAFRGT EVTNAADIRS DVSANPMNIG PKEEGHQVHS GFYNAFKAAQ SVIELSLNKP
ELKNMPLYIT GHSLGGALAV VATYCISNDS VGACYTFGGP RVGNMLFGQS IRTPVYRVIN
AADLVPRLPP SYLIEGITLL LRWLPIIPYN NQVADYLERF RHYRHYGDLR YLTDATRSTP
EGEGMLAAYP GLQVIANPCQ LSRWIWLCSR LIATYGRAGI NDHSIDIYVE KLAYWGIQRN
LGKPKLVSAQ AETKGSTQ