Gene Ping_1834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1834 
Symbol 
ID4626129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2223850 
End bp2224842 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content38% 
IMG OID639797008 
Productisoquinoline 1-oxidoreductase maturation factor 
Protein accessionYP_943210 
Protein GI119945530 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1975] Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.353011 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACATC ATATTGAAGA TTTACTTTCT CAGTGGAACA TGTATCCAAA TGATAAATGG 
GTACTGGCAG TCATCACTAA AATTCAAGGC TCTTCTTATC GGAAAACCGG TGCAATGATG
TTATTTCATG CATTAGGAAA AAGCATAGGA CTGGTTAGTG GTGGCTGTTT AGAAGGTGAT
TTGCTGCGTC ATGCACAACG TGCTATTCAA CAAGATCAAG CCATTAATAT CACTTATGAT
GCCACTGACG AATCAGATGC AAGCTATCAA CTTGGTTGTG GCGGTATTGT CGATTTATTA
TTAATACCAG TAACTGCTGA CAATAACTAT CTGCATTTAC AGACATTAAT GGAGCAATTA
AAATCGGAAA ATTGTGAATA TCACTTACCA TTAGTTAAAT CAGGTACTCA AGCAGCGTCT
ATCTCAGCCA GCGTTGTTCC AATCCTGAAT AAAACTGACT ATGACTTTAG TAAAAGTACT
TACAACAAAG CTAAAGAGTC TTCTGATATA ACAATACTTC AGATACCTTG TAGAACACGT
TTCCATCTCG CTATTTTTGG TGGGGGGTTA GATGCTCAAC CTTTGACAAT GATGGCGATA
CAATTAGGCT GGAAAGTAAC GGTGTTTGAT GAACGATCTA GTTATGCGCA TCAACATCAC
TTTCCTAAAG CCAATATAAT TAAACAACCA CTCTCTCAAT TAGAAAATGA TATTTTGTTA
AATATTGATG GTGTCGTCGT TATGCAACAC AATTTAACCT TGGATGCATT AGCATTAAAA
CTAATTAGTC AAAGTCACCA AGCTTATATC GCGTTGCTTG GTCCCCGCCA TCGTCGTGAT
CAGGTTTTTA GTAAAGCAAA CATTAACTTG GATGATTTTA AGGGCTTCTT TTCAGCCCCA
GCCGGATTTG ACATAGGGGG CGAACTTCCT GAGTCTATTG CATTAAGTAT CTTAGCCGAG
TGCCATGCTG TCTTTTATAA GCGAATTCAT TGA
 
Protein sequence
MSHHIEDLLS QWNMYPNDKW VLAVITKIQG SSYRKTGAMM LFHALGKSIG LVSGGCLEGD 
LLRHAQRAIQ QDQAINITYD ATDESDASYQ LGCGGIVDLL LIPVTADNNY LHLQTLMEQL
KSENCEYHLP LVKSGTQAAS ISASVVPILN KTDYDFSKST YNKAKESSDI TILQIPCRTR
FHLAIFGGGL DAQPLTMMAI QLGWKVTVFD ERSSYAHQHH FPKANIIKQP LSQLENDILL
NIDGVVVMQH NLTLDALALK LISQSHQAYI ALLGPRHRRD QVFSKANINL DDFKGFFSAP
AGFDIGGELP ESIALSILAE CHAVFYKRIH