Gene Ping_1822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1822 
Symbol 
ID4626117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2210500 
End bp2211303 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content35% 
IMG OID639796996 
Productalpha/beta hydrolase fold 
Protein accessionYP_943198 
Protein GI119945518 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0693506 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.197549 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGTG TAATATTAAG AAATAATGTC AAAATAATAG GCAAGAAAAA TGCTCCTATT 
TTAATGTTGG CACATGGATT TGGCTGCGAT CAGAATATGT GGCAATATAT GTTACCTGAA
TTAGAAAGCC ACTATAAAAT TATATTATTT GATTATGTCG GCTCTGGAAA TTCTTTATTA
ACTGATTATT CCAAGGAAAA ATATTCTACA TTAGAAGGTT ATGCAAAAGA TATTGTTGAT
ATTATTGAAG CATTGAATTT AAAGGACGTT ACCATTATTG CGCACTCGGT GAGTTCTATT
ATTGCTTCAA TTGCTGCTAT AAAAAGACCC GAATTAATTA AGCATCTTGT GATGGTTTGT
CCATCGCCCT GCTTTCTAAA TATCCCCCCC GATTATGAGG GAGGATTTGA AAGAAGTGAC
TTGGAAGATC TCATTGAACT GATGGATAAA AATTATATTG GCTGGGCAAA TTATTTGGCC
CCCCTTATTA TGGGAAATTC ACAATCACCT GAGCTCATTG GTGAATTGTC AGGCAGTTTC
TGCAGTACAG ATCCCTTAGT GGCAAAGACG TTTGCTAAAG CCACATTTTT TTCAGATCAT
CGACACATTT TAAAAAATAT AACCTGCCCT GTGCTAATAC TACAAAGTGC GTCCGATTCA
TTGGCCGGCA TCAATATTGG ATATTACATG GCTGAAAAAA TTGCTCATAA TGAACTTGCC
ATTATTAATG CAGAAGGCCA TTGTTTACAT ATGACAAATC ACCAAGATAT TATCCCGATA
ATTCTTCGTT TTATTGGACG ATAG
 
Protein sequence
MSSVILRNNV KIIGKKNAPI LMLAHGFGCD QNMWQYMLPE LESHYKIILF DYVGSGNSLL 
TDYSKEKYST LEGYAKDIVD IIEALNLKDV TIIAHSVSSI IASIAAIKRP ELIKHLVMVC
PSPCFLNIPP DYEGGFERSD LEDLIELMDK NYIGWANYLA PLIMGNSQSP ELIGELSGSF
CSTDPLVAKT FAKATFFSDH RHILKNITCP VLILQSASDS LAGINIGYYM AEKIAHNELA
IINAEGHCLH MTNHQDIIPI ILRFIGR