Gene Ping_1794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1794 
Symbol 
ID4626076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2179387 
End bp2180646 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content41% 
IMG OID639796970 
Productglycosyl transferase, group 1 
Protein accessionYP_943172 
Protein GI119945492 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.164392 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0769947 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAC TTCTCATTAT TGGTTATGTT TGGCCAGAGC CTAACTCTTC TGCAGCAGGT 
AGTCGTATGA TGCAGTTAAT TAACTCTTTT CAAATGCAAC ACTATCAAAT TACTTTTGCC
AGCCCCGCAC AACAAACGGA GCACATGGCT GATTTAAATG CTCTGAATAT CGCAGTTGAA
AATATCAATC TTAATTGCAC CAGTTTCAAC GATTTTATTG TCAAATTAGC ACCAGATGCG
GTGATGTTTG ATCGCTTTAT GATGGAAGAG CAATTTGGTT GGCGAGTCAG TGAGCATTGT
CCGCAAGCAT TACGTATTCT AGATACCGAA GATCTATTTT GTTTGCGTCA TGCACGGCAT
CAAGCGTATA AAGAAAAGCG CAGTATCATC GACGAAAACC TACTAACTAG CGATTTAGCC
AAACGCGAAG TTGCAGCCAT ATTTCGTTCA GACATCAGCT TAATGATTTC AAGCATCGAG
GTTGAGTTAT TACAGCGACT ATTTAAAGTC GATGCCAAAT TATTGCACTA TTGCCCATTC
ATGCTCAATG AAGCGCAATT AACACAAGTA AACCCTCATT ATCAACAACG ACAAGACTTT
ATGGTTATTG GTAATTTTAG GCATGCCCCT AATTGGGACG CCGTATTGTG GCTAAAGCAA
CAAATATGGC CACTTATCCG TAAACAGTTA CCTAACGTAG TACTGAATAT TTATGGTGCG
TATCCCCCGC CGAAGGCGAC TGACTTACAT GATGAAAAAT CAGGGTTTTT AGTCAAAGGT
TGGGTAGATG ATGCTGTACT TGCTATGCAA AGCGCAAAGG TGTGTTTAGC ACCATTACGT
TTTGGTGCAG GCATGAAGGG AAAACTGGCC GAAGCGATGT ATTGTGCAAC CCCGTCAGTA
ACAACAGATG TTGGCGCTGA AAGCATGCAA ACTGAACTAC CCTGGGCGGG CGCAATAGCG
AATGACCCAC AAGCGATTGC AAATGCTGCG GTAAAATTGT ACCAAGATGA AAGTATTTGG
CAAACGGTGA GTGATTTAGG CCCTAAAAAT GCAAAAGTTA TGTACCAACA AGAAAGTATC
AATAGCGCAT TGTCACAGTG TATTAGTCAA CTAACCGATA CGTTAACTTC GCACAGACAA
GCCAACTTTA TTGGTAGCAT GCTTAATCAT CATCATCATA AAAGTACGCA GTACATGTCT
CAATGGATTG ACGTTAAAAC GCAGCTGAAA GTTATTGTTG AAGGGGCTGA TGAGCAGTAA
 
Protein sequence
MKKLLIIGYV WPEPNSSAAG SRMMQLINSF QMQHYQITFA SPAQQTEHMA DLNALNIAVE 
NINLNCTSFN DFIVKLAPDA VMFDRFMMEE QFGWRVSEHC PQALRILDTE DLFCLRHARH
QAYKEKRSII DENLLTSDLA KREVAAIFRS DISLMISSIE VELLQRLFKV DAKLLHYCPF
MLNEAQLTQV NPHYQQRQDF MVIGNFRHAP NWDAVLWLKQ QIWPLIRKQL PNVVLNIYGA
YPPPKATDLH DEKSGFLVKG WVDDAVLAMQ SAKVCLAPLR FGAGMKGKLA EAMYCATPSV
TTDVGAESMQ TELPWAGAIA NDPQAIANAA VKLYQDESIW QTVSDLGPKN AKVMYQQESI
NSALSQCISQ LTDTLTSHRQ ANFIGSMLNH HHHKSTQYMS QWIDVKTQLK VIVEGADEQ