| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1758 |
|---|
| Symbol | |
|---|
| ID | 4623963 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | - |
|---|
| Start bp | 2140471 |
|---|
| End bp | 2141133 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 639796938 |
|---|
| Product | transcriptional regulator of TetR family protein |
|---|
| Protein accession | YP_943140 |
|---|
| Protein GI | 119945460 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.77056 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGAAAA ATCAAGTTGG TAGACCTGCC GCTAAAACAA ATAATCGCGC TAAATTAATG
ACAGTGGCAT GCAAACTGTT TGTGGCTAAT GACTATGATA AAGTATCAAT TCGTGCGATT
GCCGCGCAGG AAAATTTAGA TCCCGGTCTG ATCCGCTATT ATTTTAAATC AAAGTTAGGC
CTGTTTAACG CGATGCTTAA GGAAACCTCC GCACCTTTGC TGGCTAAGTT TAATGCCGTT
GATAGTCAGC TCAACGATGC CCCCCCCTAT ATTGTCATGC AGACCTACTA CCGGATAATG
AGCCAAAATC CGGATTTTCC CAAATTAGTA TACCGAATTG CTTCAATGCC GCCGACAGAC
GTCAATCAAG AGTTAAAGAA TATCCTTAAA GATATTTTAC AGCCGAAAAA TTTAAATCTG
TTTTCGCGTT TAAAAGATAA CGGAATTTTA GAGAACAATG TTGATCCTAA GTGTGCGCAT
TTATCCTTTT TCAGCATGAT GATATTTCCT TTTTTGATTC CCGATTTATT TAAATCAGCC
ATGGATATTT CTATCACCCC TGAGTTTATG GAGCATCTTG CAGAGCAGAA TAACCAACTT
TTACACCAGG GTATAATTAC CAAAAAAACC AACAACAAGG ACGATTTAAA TGACCAGCAA
TAA
|
|---|
| Protein sequence | MVKNQVGRPA AKTNNRAKLM TVACKLFVAN DYDKVSIRAI AAQENLDPGL IRYYFKSKLG
LFNAMLKETS APLLAKFNAV DSQLNDAPPY IVMQTYYRIM SQNPDFPKLV YRIASMPPTD
VNQELKNILK DILQPKNLNL FSRLKDNGIL ENNVDPKCAH LSFFSMMIFP FLIPDLFKSA
MDISITPEFM EHLAEQNNQL LHQGIITKKT NNKDDLNDQQ
|
|---|
| |