Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_1716 |
Symbol | |
ID | 4627093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 2089413 |
End bp | 2090309 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 639796899 |
Product | NmrA family protein |
Protein accession | YP_943101 |
Protein GI | 119945421 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.871522 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.227961 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAACTA TGTCTAAAAA AATTCCAAAA ATATTAATCA CCGGCGCAAC CGGACAGGTG GGTGGGAAAG CACTGAATTA TTTATTGTTG CAAAAAGATA TTGAAGTGAT TGCAGCGGTA CGTACACAGG CTAAAGCAAC CGTGTTTCAC GACAAAGGCA TTGCCACTGT GATTCTTGAT TTCGATGATG ACAGTACGCA TCTGGGGGCT TTTGAAGGGA TCGACAGGCT GTTTATGATG ACCGGCTACA CGGTTGATAT GCTATTACAA AGCAAAGTGT TGCTGGATAA TGCCCGAAGA TCGGGAATTA AGCATGTGGT GCATCTTGGT GCCTGCGGGC CAGATGATAC CACAGTTGGG CATTGGGCCT GGCATCAGCT GGTGGAAAGA TATATAGAGT GGGGCGGATT TTCTTTTACG CATTTACGTC CTCAGGACTT TATGCAAAAC CTTTTAAGCT ATGGCAATAA AAAGGCAATA ATTGACGGGG TGATTAATGC CTATGTTGAC CGAGCATCGC TGAGTTGGGT CGATGTTGAT GACCTGGCGC AAGTGGCAGC TTTGGCTTTA GCCTATCCTG AAAAACATGC CGGCAAGACA TACCGGCTTG GGTATGATGC CAAAACCTTT GACGAATTAG CTGCGCTAAT GACGGCTATT ATTGGCAAAC CTTTCCGCTA TGAAGCCTTG TCTCCTGAAA TATTTTTACA GGCGATGCAA GATTCAGGTG CGGAAATGAC CTATATGGGC TGTGTCTATA ACCATTGGAA ACGCCATGCA GCAGGCACAA TTCCTAATGC TAATGAAACA TTTGATAATT TCTTTGAAAT AACCGGCAAA AAACCGACTA AATGGGCTGA TTTTATACAA AAACATCAAG CTGAACTGGA CTACTAA
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Protein sequence | MITMSKKIPK ILITGATGQV GGKALNYLLL QKDIEVIAAV RTQAKATVFH DKGIATVILD FDDDSTHLGA FEGIDRLFMM TGYTVDMLLQ SKVLLDNARR SGIKHVVHLG ACGPDDTTVG HWAWHQLVER YIEWGGFSFT HLRPQDFMQN LLSYGNKKAI IDGVINAYVD RASLSWVDVD DLAQVAALAL AYPEKHAGKT YRLGYDAKTF DELAALMTAI IGKPFRYEAL SPEIFLQAMQ DSGAEMTYMG CVYNHWKRHA AGTIPNANET FDNFFEITGK KPTKWADFIQ KHQAELDY
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