Gene Ping_1716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1716 
Symbol 
ID4627093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp2089413 
End bp2090309 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content44% 
IMG OID639796899 
ProductNmrA family protein 
Protein accessionYP_943101 
Protein GI119945421 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.871522 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.227961 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAACTA TGTCTAAAAA AATTCCAAAA ATATTAATCA CCGGCGCAAC CGGACAGGTG 
GGTGGGAAAG CACTGAATTA TTTATTGTTG CAAAAAGATA TTGAAGTGAT TGCAGCGGTA
CGTACACAGG CTAAAGCAAC CGTGTTTCAC GACAAAGGCA TTGCCACTGT GATTCTTGAT
TTCGATGATG ACAGTACGCA TCTGGGGGCT TTTGAAGGGA TCGACAGGCT GTTTATGATG
ACCGGCTACA CGGTTGATAT GCTATTACAA AGCAAAGTGT TGCTGGATAA TGCCCGAAGA
TCGGGAATTA AGCATGTGGT GCATCTTGGT GCCTGCGGGC CAGATGATAC CACAGTTGGG
CATTGGGCCT GGCATCAGCT GGTGGAAAGA TATATAGAGT GGGGCGGATT TTCTTTTACG
CATTTACGTC CTCAGGACTT TATGCAAAAC CTTTTAAGCT ATGGCAATAA AAAGGCAATA
ATTGACGGGG TGATTAATGC CTATGTTGAC CGAGCATCGC TGAGTTGGGT CGATGTTGAT
GACCTGGCGC AAGTGGCAGC TTTGGCTTTA GCCTATCCTG AAAAACATGC CGGCAAGACA
TACCGGCTTG GGTATGATGC CAAAACCTTT GACGAATTAG CTGCGCTAAT GACGGCTATT
ATTGGCAAAC CTTTCCGCTA TGAAGCCTTG TCTCCTGAAA TATTTTTACA GGCGATGCAA
GATTCAGGTG CGGAAATGAC CTATATGGGC TGTGTCTATA ACCATTGGAA ACGCCATGCA
GCAGGCACAA TTCCTAATGC TAATGAAACA TTTGATAATT TCTTTGAAAT AACCGGCAAA
AAACCGACTA AATGGGCTGA TTTTATACAA AAACATCAAG CTGAACTGGA CTACTAA
 
Protein sequence
MITMSKKIPK ILITGATGQV GGKALNYLLL QKDIEVIAAV RTQAKATVFH DKGIATVILD 
FDDDSTHLGA FEGIDRLFMM TGYTVDMLLQ SKVLLDNARR SGIKHVVHLG ACGPDDTTVG
HWAWHQLVER YIEWGGFSFT HLRPQDFMQN LLSYGNKKAI IDGVINAYVD RASLSWVDVD
DLAQVAALAL AYPEKHAGKT YRLGYDAKTF DELAALMTAI IGKPFRYEAL SPEIFLQAMQ
DSGAEMTYMG CVYNHWKRHA AGTIPNANET FDNFFEITGK KPTKWADFIQ KHQAELDY