Gene Ping_1622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1622 
Symbol 
ID4623608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1975332 
End bp1975916 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content43% 
IMG OID639796808 
Producthypothetical protein 
Protein accessionYP_943018 
Protein GI119945338 
COG category[S] Function unknown 
COG ID[COG2928] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.267647 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.10718 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAAAA CATTATTACG GGGAATATTA AATCTATTAC CCTTGGCAGT GTCGGTGTGG 
TTATGTTGGT CTATTACCGT GGCGCTCGAT GATATGGGGC ATGCTGTTTT AACCTTAATT
GGCCTGGGTA ATCAGTGGAC AGGCAGTGGT TTTATCCTTA TTTTTTGTTT GTTACTGGTG
GCCGGCGTGG CCTTTAGCGT CAGCCCAATC ATTTGGTTGT ATCAAAAGCT TGAGAAACAG
ATATTACGTT TCCCCTTTTT TAGAACTATT TATACCTCGA TCAAGGATTT AGCATCGCTG
GCAGGCAGTG ACGGATCAAA AGCCCAAAAA CGTCAGACAG TGCTGTTTAA ACAAAGCAAT
GGCACTTTTA TTATTGGCTT TGTGACCTCT GAAAGTATCC CGAAGGCCGT GAATGATGCT
TTACCTAACG ATCAATGGGT GCCTGTTTTG ATTCAAATGA GTTATCAGGT AGCAGGAATC
ACTTCACTGG TCAAACGTAG CGATCTTATT TATGTTGACT GGCCTTTTGA AGACGCCATG
CGTTTTATGT TAACCGCAGG CATTTCGCCA GCAAAGCCGA AATAG
 
Protein sequence
MQKTLLRGIL NLLPLAVSVW LCWSITVALD DMGHAVLTLI GLGNQWTGSG FILIFCLLLV 
AGVAFSVSPI IWLYQKLEKQ ILRFPFFRTI YTSIKDLASL AGSDGSKAQK RQTVLFKQSN
GTFIIGFVTS ESIPKAVNDA LPNDQWVPVL IQMSYQVAGI TSLVKRSDLI YVDWPFEDAM
RFMLTAGISP AKPK