Gene Ping_1587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1587 
Symbol 
ID4625384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1942972 
End bp1943514 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content42% 
IMG OID639796774 
Producttranscriptional regulator, Fis family protein 
Protein accessionYP_942984 
Protein GI119945304 
COG category 
COG ID 
TIGRFAM ID[TIGR01907] CRISPR system CASCADE complex protein CasE/Cse3 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.551291 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.450631 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATTTAT CACAGGTGAT GCTCAACACG CATGACATTT ATGAGCAGCA TCAAGCTATT 
TGGAGTTTGT TTGAGAATGT AGCAGATCGT AAGCGTGATC ACTTATTTCG GGTTGAGGTC
GCGGATCGGC AATCGTGTAA AGTTTTGTTG CAATCAAGCA CTGAGCCTAA AAGCAGCGAA
CAAGCCAAGG TGTTAGCCAG TAAGTCATTT TTGGCTGAGA TTAAGCAAGA TGCATTTTAT
AAATTCAAGC TGCTGGCTTA CCCGACAAAG TGTTTAAGCC AAGGTAAAAA AGTAATAGAA
ATAAAAGAGG CTAATGAACA GGTACAGTGG CTACAGCGAA AGCTTAGTGG TGCCAATGTT
ACTGTGACAG CCATGGATGA CCTCATGGTG CGCAGTAAAA AGTCATATAA CAGCCGCTTC
GTCTGCTTTG AAGGTATTTT ACAAGTAACA GATAGTGAAC AAATACAGCG TGCATTAGTG
ATGGGAATTG GCCGTAAAAA ACATGCGGGA GCAGGTTTGC TATCACTTGC CCGCACACAA
TAG
 
Protein sequence
MYLSQVMLNT HDIYEQHQAI WSLFENVADR KRDHLFRVEV ADRQSCKVLL QSSTEPKSSE 
QAKVLASKSF LAEIKQDAFY KFKLLAYPTK CLSQGKKVIE IKEANEQVQW LQRKLSGANV
TVTAMDDLMV RSKKSYNSRF VCFEGILQVT DSEQIQRALV MGIGRKKHAG AGLLSLARTQ