Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_1586 |
Symbol | |
ID | 4625383 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 1940498 |
End bp | 1942969 |
Gene Length | 2472 bp |
Protein Length | 823 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639796773 |
Product | hypothetical protein |
Protein accession | YP_942983 |
Protein GI | 119945303 |
COG category | [R] General function prediction only |
COG ID | [COG1203] Predicted helicases |
TIGRFAM ID | [TIGR01587] CRISPR-associated helicase Cas3 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.271584 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.677902 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACATT TAATAAATAG AAAAAATTCT CACGATGAAA AAATTAACAC TTATTTCATG TACTGGGGAA AGGCAAAGAG CGAGTCACAG GCAACGGGTG CTGATTATCA TTTATTACCC TATCATTGCT TAGATGTGAC GGCGGTAGCT GATGTGTGGC TAGAGGAATC TAATATTCTA CTGTCGCAAA TATCTTGTTA TTTGGACACA ACTCAAGATC AGGCAAAACG AATTTGCTTG TTTTTTATCC TACTCCACGA TTTAGGAAAG TTTGATGCGC GCTTTCAAAA CTTCCGTGAA GATATTCGTC AAATATTACA AGGTGATGAT TGGGAAATTG AACCAGATCC AACCTATTAC TCGCATGGCT CTTGCGGTTA TCGGCAATTT AGTGAGATGT TCGATACTAA TGAAGCGATG AAAGCAGTGG CGGGGCATCA CGGTTCTTGT GATACCTCTC AGCCCTACCA TGATCCAGAT GCGGATGACG AGCTGCTAGA GCTAGATGAA CAAGCTAGAA AGGAATGGGT TGAGTTCAGT CTTGACTTTT GTCAGTTAAA AGAAGTTCCC GATGTCGGTG ATATTCCCAT GTTGGCCGGT TTGTGCAGTG TTGCTGATTG GGTGGGGTCA TCCATCACTA ATTTCACAAC TGATCCATCT ATTAATTTAC AGCAGTATTA TCAAGACACT TTACTTCGAG CAAGAAAAGC ACTCGTCGAT ACAGGCATGA TTGAAAAATC ACAGGGAGCG GGGTTTGCTT ATTTATTTAA CGGGTATCGT CCTCGGGGCA TTCAAACATT ATTGAGTGAG ATGCCATTAA AAGCGGGACT GACCTTAGTC GAGTCGGATA CCGGATCAGG TAAAACAGAA TTTGCGTTAG CTTATGCGTC CTCTCTTATT GAAGCTGGGC TTGCAGATGG AGTGGTATTT GGTTTACCCA CACAGGCAAC CGCCAATGGT CTATTTTCTC GCGTGGGAGA TGCTGCAAAG AAATTATTTC CTGATACAAA AACGACACTT GCGCATGGTA AATCTAAATA TTTGATGTCA GATGAAAGCG GTTTTTTACA GCAATCAAAT AAACGCGCTT TCTTAGGCTC AATGTCAGTG GCAACCATAG ATCAAATTCT GATGGGCGTG CTGGGTATTC GCCATCAATT TGTCCGTTCA TTTGGTACGC GAAAATCTGT GTTGGTGCTC GACGAAATTC ACAGTTTTGA TGCCTATATG TTGGGCCTTA TCGAACAAGT TTTAAAAGGG CAGCATCAAG CCTATTCAAG TGTGATTTTA CTTTCCGCCA CATTGCCTAA TACGCTAAAA GAAAAACTAC TCTCAACTTA CAAAGGAAAA TCGCTTAATA ATGCGTATCC GCTTGTTAGC CATACTGACT TATTCGCTAC TACCCAAGAA TTTACCTTGC CTAAGCAAGC AACTAACAAA ACGATCACTT TAAAAACATG GTGTAGCGAT GATCTCTTAC CCAGTATTAA TCAGCGAAAA AAGATGATTG ATTGGGTATC TCAGGGCGCT ATGGTTGGGG TTATTTGCAA TACAGTAAAA GATGCACAGC GGTTATATCA CCAGATTAAA ATAGCAAATC CAGAACTGAA AATAGAATTG TTTCATGCGC GTTTTACCTT TGGCGACAGG AAAAAACGAG AAGATCAGGT GCTTAAAAAT TATGACAAAA ATGCTAAACG CACGGGACGA CTGCTTATTG CCACTCAAGT AATAGAACAA TCACTTGATT TAGATTTTGA TGTGCTAATC AGTCAAATTG CACCTATTGA ATTTTTGATG CAGCGCATGG GCCGATTATG GCGGCATGAG CGTATAGACA GTGGTTTATG TCCGCGGGCA AGTTGTATTA AAGCACCTTT ATTTATCACT TTATTACCCA ATGAGAAAAT AACAGATCTG ACATCGAGTG AGCAATTAAA GCATCATTAC CAAGGCAGCG GATATGTTTA TCAAAATAGC CGCTTACTTT ATCGCACTGA GCAATATCTA AATCAACATC CATTGTTACA TTTTCCTGAT TGCTACCGAG AGGCGATAAA TTATGTTCAC GAGGAACAAT CTTACTCGGA GGAGCCACAA GTTTTAACTT CCGTGGCAGA TGAATACAGT ATTATAGCTG ATGGTAGTAA CTATACCGCT CGTTCTTTAA GCAAACTGCA GTCAAAGCCA CTTAATGATG TTGATCCGCG CTGCGCATTG TTAACCCGAG ATGGTGAAAT GAGTGCCACT GTAGTGCTAT TTAAGGAAGA CGGTAGTTTA TTACACGGTG GGGATTTTAA TGAGCAGCAA GACCGAGAAA ACAGCACAGT CGCATTGGCA AAAAAACATG CCAAAGGGAT AAAGGACGAA CGCTATTACT GCTATAAGGC GGTAGTGGAC AAAGATATTA TTTATAACGA GATGGGGTTT ATAACGACCG ATCTCATCGA TGAATTAACA GCAGGGAGTT AA
|
Protein sequence | MKHLINRKNS HDEKINTYFM YWGKAKSESQ ATGADYHLLP YHCLDVTAVA DVWLEESNIL LSQISCYLDT TQDQAKRICL FFILLHDLGK FDARFQNFRE DIRQILQGDD WEIEPDPTYY SHGSCGYRQF SEMFDTNEAM KAVAGHHGSC DTSQPYHDPD ADDELLELDE QARKEWVEFS LDFCQLKEVP DVGDIPMLAG LCSVADWVGS SITNFTTDPS INLQQYYQDT LLRARKALVD TGMIEKSQGA GFAYLFNGYR PRGIQTLLSE MPLKAGLTLV ESDTGSGKTE FALAYASSLI EAGLADGVVF GLPTQATANG LFSRVGDAAK KLFPDTKTTL AHGKSKYLMS DESGFLQQSN KRAFLGSMSV ATIDQILMGV LGIRHQFVRS FGTRKSVLVL DEIHSFDAYM LGLIEQVLKG QHQAYSSVIL LSATLPNTLK EKLLSTYKGK SLNNAYPLVS HTDLFATTQE FTLPKQATNK TITLKTWCSD DLLPSINQRK KMIDWVSQGA MVGVICNTVK DAQRLYHQIK IANPELKIEL FHARFTFGDR KKREDQVLKN YDKNAKRTGR LLIATQVIEQ SLDLDFDVLI SQIAPIEFLM QRMGRLWRHE RIDSGLCPRA SCIKAPLFIT LLPNEKITDL TSSEQLKHHY QGSGYVYQNS RLLYRTEQYL NQHPLLHFPD CYREAINYVH EEQSYSEEPQ VLTSVADEYS IIADGSNYTA RSLSKLQSKP LNDVDPRCAL LTRDGEMSAT VVLFKEDGSL LHGGDFNEQQ DRENSTVALA KKHAKGIKDE RYYCYKAVVD KDIIYNEMGF ITTDLIDELT AGS
|
| |