| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1580 |
|---|
| Symbol | |
|---|
| ID | 4625432 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 1932309 |
|---|
| End bp | 1933436 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 639796768 |
|---|
| Product | putative secreted hydrolase |
|---|
| Protein accession | YP_942978 |
|---|
| Protein GI | 119945298 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5621] Predicted secreted hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.125275 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.120908 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAAAAAAG TTAATAAATA CAATGGTATT TCATCTAAAA AAATATTGGT TATATTATTC
ATTGTCTTTT TTTTATTCTT ATTGAGTATT GCTCTTTTAA GCAAAGAACC CCCGAAGGGG
AACCCTCTGA TGGTGCTAGC AGAGGATTAT ACGCAATATG AATTACCGTC AGAAAATCAA
AAGATCATCT TTCCACAAGC ACATTGGCCG CATAGGGGAT TTCGCCATGA ATGGTGGTAT
TTAACGGCCA ATTTAAGCAC TGAAAGCGGT CAGCGTTTTG CCACTCAGTG GACACTATTT
CGTACTGCTA TTAATGATCA GCATTGGTAT TTTGCCCATG CAGCTTTAGC TGATACAACC
GTTCATTTGG CCGAATTTCG TGACGGACGA GAAGAGTTAG GCAATGTTGA ATTAATAAAC
TTTCCGTTTA CTGCGCTAAT AGACGATTGG AGCTGGCGCT CTTCTGCGCA GCTATTACCT
GCGCAGTTAA CTTATGGCAG TGCGAAGTAT GGTTTAGCTG GTGGTATGGC TGACGATCCT
GATTTTCCGC TAACAAACTG GCAAGTTAAC CTCTTTTTAG CTGATGCCAA CCCTTTTTAT
CTGCAGGGGG TGAACGGTTT TAGTAAAAAA CATCCCAGTA AAGATATCGC CAGTTATTAC
TATTCACAGC CATTTATTAG TGTCAAAGGT GATATTTTAT GGCAGGGGGA ACGTTCGAGT
GTCACTGGAA CGGCTTGGTT TGACCGCGAG TGGGGATCAA AAATGCTAGC TCCGGAACAA
AAAGGTTGGG ACTGGTTTTC ATTGCGTTTA ACTAAAGACA GGGCATTGAT GATTTACCGT
ATCCGTTCAG AGAAAAATGA TTTTCTGTAC GGAAGTGTAA TGGATAGCAG CGGTGACATA
AAAATATTAG CGACTAAGGA TATCAGGCTA AAAAGTCAGG CAATGGTTCA AGGGAATTAC
CCGCAGGCTT TTACTCTGGA GGTTCAACCA CTTGGTATCA ACTTAATGAT TAAGATCGTC
AACGACCAGC AAGTGATGCG CTTTGGCATT GAATATTTCG AAGGTATGGT CACTTTTAGC
GGCTCACACA AGGGGGAAGG ATTTGTTGAA ATGACCGGTT ATCATTAA
|
|---|
| Protein sequence | MKKVNKYNGI SSKKILVILF IVFFLFLLSI ALLSKEPPKG NPLMVLAEDY TQYELPSENQ
KIIFPQAHWP HRGFRHEWWY LTANLSTESG QRFATQWTLF RTAINDQHWY FAHAALADTT
VHLAEFRDGR EELGNVELIN FPFTALIDDW SWRSSAQLLP AQLTYGSAKY GLAGGMADDP
DFPLTNWQVN LFLADANPFY LQGVNGFSKK HPSKDIASYY YSQPFISVKG DILWQGERSS
VTGTAWFDRE WGSKMLAPEQ KGWDWFSLRL TKDRALMIYR IRSEKNDFLY GSVMDSSGDI
KILATKDIRL KSQAMVQGNY PQAFTLEVQP LGINLMIKIV NDQQVMRFGI EYFEGMVTFS
GSHKGEGFVE MTGYH
|
|---|
| |