Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_1579 |
Symbol | |
ID | 4625431 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 1929871 |
End bp | 1932312 |
Gene Length | 2442 bp |
Protein Length | 813 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639796767 |
Product | ABC-type transporter protein |
Protein accession | YP_942977 |
Protein GI | 119945297 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.15291 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.104036 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGCTTTCT TAATTCCCCA AATGGTTACT CCAGTCGCTA AAATTAAAAA ATGGTTTAAC CAAGATCTTT ATTTGGTATT AAAAACCCAA GTTGCAGAAT ACAAAAACAA ACCACTCCTA CACCTTGCCT TTATACTCAG TTTAGCAATA GCAACCAGTA CATTGTTATC TGTTTTGGTG TTAAATCATG CCAGTAGAGA GCAATATCAA CAAGCAAATT CTTTGTTAAA AAATCCCGTG GGTTTTCATA TTATTGCCCA GCAGGGAAGT AAACTGAAGA AAGAAGATTT TTTCAGCTTA AGAAAAAAAG GTTTTACCCA AATAACCCCA GTGCTAACCT TTCGTAAAAA ACTGACTAAC GGCAAATATA CTACCTTCAC CGCGATCGAT TTATTGGCAC TCAGTTTGAT AAAAGCAGAG CACTTTAATA GCCAAAGTGT ATCACTGACG GAGGAGTACG CTAGATCCCT ATTATTATTC AATGGGGGAA GTAAAAATCA GGATAAACAA TTTTTTTTAG CTGACAATCG CGCTATCCCC TTCAGCATTA GACCAGCAGG ACAATGGCAA GATCAAGCAT TACTCGATAT AACCCTTGCT TGGAAACTAT TTCCAGAAGA GGGGGATTTT AGTTATCTAC TGGTTGCACC CTTGAGTGAG CAAAGTAAAG AAATACTGGA ATCTGTTTTA CCGACACATT TATCTTTATA TAAACCATGG TCAGTAGAAG AACGTCAAGG TTTTGCAGAT GCACTGCATC TCAATCTCAA TGCGCTGGCT ATTTTAGGTT TTATTGTCAG TTTATTTATT GCTTTTCAGG CGGCTAACCA GGCATGGCGA AAACGCGCTC AATTAACAGC ACAGTTACGC TTATTAGGCG TGCAGTTGTT TACCATAAAA ATTGCAGTGA TAATTGAAGC ATTATTTTTA GTTACCATGG CCACTGTACT AGGGATTTTA CTGGCCATCG GCTTAGTTTC TATTTTACTC CCCCTATTAG GTTTAACCCT TAAACAATTA TATTCCCTAA ACAGCAGTGG GCATTTTATA TGGCAGTGGT CGTATAATTT ATGGGCATTT TTCATTTCAT CGCTTGCAGT CCTGCTGGCA TTAATGAAGC AGTTTAAGCT GCTCTCCAGT AAATATATCG CTCGTTCTGC TCACTTGCAA CGTGAGCTAT TCTCTGCTCG AAAACACCTC ATAGCAACGT TTCTGCTGTT AGCTTTATTT ATACTTTGGC CAAATAATAA CTGGTTACAG TTAATGATTA AATACGGTTT GTTATTGATG GCAAGTATTG TTTTTTTGCC TGTTTTTTTA CAATTAACCC TTTTTTTAGG TGCTAACTTA GGTAAATCGT TCCGCTTTAA GTTCCTTATT AAAGATGCGT ATCAGCAGAT AAAACGGCGT TATTTACCGC TTGCGTCTTT TTATTTGGCG CTAACGGCCA GTATTGCTGC GGCGTTATTG GTCAATAGCT TTGAAAGCGC TTTTGTACGC TATCTTGATC AGCAATTAAA TGCAGACATT TTTATTCGCC ACAAGGCTTG GCAAAAAGAA ACTATAGAGG ATTGGTTAGG GACTCAATCC GCACTAAAAG AATATACTCT GTTTCAGCAT ACTTGGGCAA AAATAGAAAC CGAGTCAGTT AAGCTAGTCA ATCACCAATC CTTGCGCCAG TTGGAATCAC TGCTGCTTAA ATCGTCTGAC CATAGTGATG AAGAGGGTTG TTATATCAAT GAGCAGCTGG CCTTGAAAAA AAAGCTAAAC ATAGGGGGGG AAATAAAAAT AACACAAGGC AAACAAGTTT ATCAATGCAA TGTAAAAGGA GTCTACTACG AGTATGGATA CCCGGGTTAT TCTGTTACCG TTGACAATGC GCCATTAACC ACTCATTTTA GTGGCTGGGC CGATACAGGA TTTGGTTTGT TTTTTGAATC GGGGCAGTTG ATTACAAAAC AAGAGATTAT AACGGCATTA AAACTCGATT CTCAACAGGT ATATCAACCG CAGCAGATTA AAATTTTGGC TCTGGAAATT TTTTCGCAAA CCTTTATTCT GATCCAGGCT ATTACAGCGG TTTTATTATT GGTCGCCTGT TTTGGTTTAT TTTTGTCCGC ACAGAGTTTG GAGTTGGCTC GTAAAAGCGA TTTATATATT CTTTACAGTT TGGGATATGA CAAAAAGGCG CTGTTTACCC ACATGTTGGT GCAATGGTTA TTGCTTGTTT TATGCTCTAT TATATTGAGC TGGCCGATTG CAACGCTTCT GGCTAATGCA TTAGTCACAG AGGTTTTACC GGCATCTTTT GGCTGGTCTA TGCCGTTGAT GATCAATATT GCCCCCTTTG TTGTCAGCAG TTTGCTCGGT TTACTCTTAT TAATTCCGGC GGTAAGTATT CCCCTGCTTA AACTGAATGT CAGGAAAAAT TTATGTCCTT GA
|
Protein sequence | MAFLIPQMVT PVAKIKKWFN QDLYLVLKTQ VAEYKNKPLL HLAFILSLAI ATSTLLSVLV LNHASREQYQ QANSLLKNPV GFHIIAQQGS KLKKEDFFSL RKKGFTQITP VLTFRKKLTN GKYTTFTAID LLALSLIKAE HFNSQSVSLT EEYARSLLLF NGGSKNQDKQ FFLADNRAIP FSIRPAGQWQ DQALLDITLA WKLFPEEGDF SYLLVAPLSE QSKEILESVL PTHLSLYKPW SVEERQGFAD ALHLNLNALA ILGFIVSLFI AFQAANQAWR KRAQLTAQLR LLGVQLFTIK IAVIIEALFL VTMATVLGIL LAIGLVSILL PLLGLTLKQL YSLNSSGHFI WQWSYNLWAF FISSLAVLLA LMKQFKLLSS KYIARSAHLQ RELFSARKHL IATFLLLALF ILWPNNNWLQ LMIKYGLLLM ASIVFLPVFL QLTLFLGANL GKSFRFKFLI KDAYQQIKRR YLPLASFYLA LTASIAAALL VNSFESAFVR YLDQQLNADI FIRHKAWQKE TIEDWLGTQS ALKEYTLFQH TWAKIETESV KLVNHQSLRQ LESLLLKSSD HSDEEGCYIN EQLALKKKLN IGGEIKITQG KQVYQCNVKG VYYEYGYPGY SVTVDNAPLT THFSGWADTG FGLFFESGQL ITKQEIITAL KLDSQQVYQP QQIKILALEI FSQTFILIQA ITAVLLLVAC FGLFLSAQSL ELARKSDLYI LYSLGYDKKA LFTHMLVQWL LLVLCSIILS WPIATLLANA LVTEVLPASF GWSMPLMINI APFVVSSLLG LLLLIPAVSI PLLKLNVRKN LCP
|
| |