Gene Ping_1575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1575 
Symbol 
ID4625427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1925177 
End bp1926367 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content46% 
IMG OID639796763 
ProductAFG1 family ATPase 
Protein accessionYP_942973 
Protein GI119945293 
COG category[R] General function prediction only 
COG ID[COG1485] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.417886 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.151387 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGATG GGTCAAGCAG TACACTGACA GTTAACTCCC CACTTGGCGT ATATCAAGCG 
CAATTGGGTA GCAAGCTTGT TGACGATCCC TCACAACTAC AAGCAATAAT TGCTCTGGAT
GCACTGTTTA GCCAATTAAA TCAGCAAAGT ACAACGTCAC CCGGGCCCAT TAAAGGGCTT
TACCTGTGGG GCGACGTGGG ACGGGGTAAA ACATTTTTAA TGGACTTGTT TTATGATTGC
TTGCCACAGG AAGGCAAACT GAGACTGCAC TTTCATCATT TTATGGCACG CATTCATCAC
GCCCTCAAAG AGCATGCAGG TCAACAAGAT CCTTTGGTGC TCATTGCCAA AGACCTGGCT
AAAGAATGCC ATATATTGTG TTTTGATGAG TTTTTTGTTT CCGACATTGG CGATGCCATG
ATACTGGCAG GTTTGTTTGC ATCTTTGTTT AAACAAGGGG TGGTGTTAGT CGCTACGTCG
AATATACCCA TCGAGCGTTT ATATGAAAAT GGCTTAGCCC GGCATAAATT TTTGCCCTGC
ATTGCCCTGC TACAACAACA TACGCAAATG TTGCATCTGG ACGGTGAGCA AGATCACCGC
TTACATCAAC TAGATGTACA ACAAAATGAA ACTGGGTTTA TCACCCCATC CAGGCATGTG
GGAATGACTG GGGAAATGGA TTTTTCAGCT GTTTTTTCTG AACTAACGCA AGCCACTCCC
TCAGCAAAAA CCAACCATAG CAGCATCAAC ATCTGCCACC GTGAGATCAC TGTGGTTTGC
GCCACTGACA GCAATATTCC AAACTCAATT GTGTGGTTCG ACTTTTACGC TTTGTGTGAT
GGCCCCCGTT CGCAACTTGA CTATATGGAA ATTGCCACTC GCTTTAATAC TGTGATGATA
AGTGGTGTAC CGCAATTAGG TGGCCAGGTA CGGGGATGGA TTAAGGCCCG TGGCACCGAA
GATGGCATAG GTGATAACCA GGCTACCAGC ACTGGTGAGC GTATATTATC TTATGCGGCT
AATGACGATA TGGCCCGGCG TTTTATCAGC CTAATTGATG AGTTATATGA GCAAAAAGTA
AGGCCCTATT TAAGCTGTGA TGTGCCATTT GCCGAGCTTT ATTTAGAAGG CGCACTGATA
TTTGAATTTC GCCGCACGTA TAGTCGCCTG ATTGAAATGA GTCAGGGCTA A
 
Protein sequence
MPDGSSSTLT VNSPLGVYQA QLGSKLVDDP SQLQAIIALD ALFSQLNQQS TTSPGPIKGL 
YLWGDVGRGK TFLMDLFYDC LPQEGKLRLH FHHFMARIHH ALKEHAGQQD PLVLIAKDLA
KECHILCFDE FFVSDIGDAM ILAGLFASLF KQGVVLVATS NIPIERLYEN GLARHKFLPC
IALLQQHTQM LHLDGEQDHR LHQLDVQQNE TGFITPSRHV GMTGEMDFSA VFSELTQATP
SAKTNHSSIN ICHREITVVC ATDSNIPNSI VWFDFYALCD GPRSQLDYME IATRFNTVMI
SGVPQLGGQV RGWIKARGTE DGIGDNQATS TGERILSYAA NDDMARRFIS LIDELYEQKV
RPYLSCDVPF AELYLEGALI FEFRRTYSRL IEMSQG