Gene Ping_1538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1538 
Symbol 
ID4626204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1884745 
End bp1885179 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content35% 
IMG OID639796736 
Producttransposase, IS4 
Protein accessionYP_942946 
Protein GI119945266 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0513337 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.300006 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAATT TAACGGATAT ATTTTGTGAT GTAGATGATT TTTGCAACGT TTTTATCCCC 
GAGTGGGAAG CGTGTTTAAT AAGCAATGGT GGGATAAAAA GACGAAGAGT CAAGTGTATG
AATAATGCAG AAATAATGAC AATTATCATT AGCTTTCATC AATCTCATTA CAGAGATTTC
AAAAATTATT ACTTAGGCTA TGTCGCAAGG CATTTAAAAG AATATTTCCC CTCATTACTG
AGCTATACAA GGTTTATAGA GGTTATGCCA TCTGTCATCA TTCCTTTGAA TACCTATCTA
ACGACATTAT TTGGCAAGCC AACGGGGATT GCTTTTGTTG ACTCCACAAA ATTTGCGGTA
TGCCATAGTA TTAGAGCAAA ACGTAACAAG GTTTTTAACG GAACGGCCAA GCATGCGAAA
GGTAAGGATA AGTAA
 
Protein sequence
MINLTDIFCD VDDFCNVFIP EWEACLISNG GIKRRRVKCM NNAEIMTIII SFHQSHYRDF 
KNYYLGYVAR HLKEYFPSLL SYTRFIEVMP SVIIPLNTYL TTLFGKPTGI AFVDSTKFAV
CHSIRAKRNK VFNGTAKHAK GKDK