Gene Ping_1534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1534 
Symbol 
ID4626200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1881745 
End bp1882296 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content47% 
IMG OID639796733 
ProductCMP/dCMP deaminase, zinc-binding 
Protein accessionYP_942943 
Protein GI119945263 
COG category[F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0590] Cytosine/adenosine deaminases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.88198 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.312131 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGATC TGATAGAATT AAGAAAAGCG CTGGTAACTC ATCAGATAGA CAAGAATTTC 
CCCGAAGAAT CTCTAGGAAA AAGATGTTGC GAAATCGCCT GTGGGTCTCT GGAAAATGGT
TGTTATGGTG TAGGAGCTAT TCTGTTCGAT AAAAATGATA ATATTCTCAT TGAAGCGGGT
AACGAAATGT TCCTTGAGGG ATTTCACTCG GCAAGACATG CCGAGATGTT GGTTATTGAC
CGTTTTGAAT TACAGTATCC CGAATATGGT GATCGCAGCG GGTTAACTAT AATGGTCTCT
CTTGAACCAT GCCCGATGTG TCTCACCCGG TTGCTGCTAG CCGGGATTGG TGAAATAGTA
TATCTGGTGA ATGACGATGT AGGAGGTATG GCCGAGAGAA TCGACCGAAT GCCTCCTGCC
TGGATTAATC TGGCCAGCCT GCAAAACCGC AGATTGGCCA AAGTCTCCAG GCCCCTTGCC
AGACTAGCGA CACGCTTGGC CGGTTGTCAT TTAGGCGAGT TACGGAGCCG CCTTCTTGCT
CATATCCGTT AG
 
Protein sequence
MDDLIELRKA LVTHQIDKNF PEESLGKRCC EIACGSLENG CYGVGAILFD KNDNILIEAG 
NEMFLEGFHS ARHAEMLVID RFELQYPEYG DRSGLTIMVS LEPCPMCLTR LLLAGIGEIV
YLVNDDVGGM AERIDRMPPA WINLASLQNR RLAKVSRPLA RLATRLAGCH LGELRSRLLA
HIR