Gene Ping_1533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1533 
Symbol 
ID4626199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1880892 
End bp1881314 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content36% 
IMG OID639796732 
Productheat shock protein Hsp20 
Protein accessionYP_942942 
Protein GI119945262 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.207706 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.208575 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAACA TAATACCAAG AAAGCAATGG TTAAGCCCTG AACATATTTT GGACGATTTT 
TTTGCCTTAA ACAAACTAAA AGGTGGAGAG GGTTATTTTG AACCACGCGT AGATATTATT
GAAAAAGATG ATAAATTTAT CTTCGTCGCT GAGTTGCCCG GAGTCGAAAA AAAGGATATC
AATGTCCAAC TCCAAAATGG TTTGCTGACC ATTGAAGCTA AGATGTATGA AGACAAAGAA
TCTGAAGTAG ATAATGTTAT CAGAAAAGAG ATAAGGAGTG GTTTCTTTAG CCGCAGCATT
AATGTAGGAC AAAATGTTAA AGAAGAAGAC ATAAAAGCCG AATTGGTAAA CGGTTTATTG
AAGCTCACCG CGCCAAAAAT AAAACCAACG GGCAGTGAGG TTCATAAGAT TGCAATCTCA
TAA
 
Protein sequence
MNNIIPRKQW LSPEHILDDF FALNKLKGGE GYFEPRVDII EKDDKFIFVA ELPGVEKKDI 
NVQLQNGLLT IEAKMYEDKE SEVDNVIRKE IRSGFFSRSI NVGQNVKEED IKAELVNGLL
KLTAPKIKPT GSEVHKIAIS