Gene Ping_1510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1510 
Symbol 
ID4626566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1856959 
End bp1857423 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content35% 
IMG OID639796711 
Producthypothetical protein 
Protein accessionYP_942921 
Protein GI119945241 
COG category[R] General function prediction only 
COG ID[COG4245] Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.836921 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0611826 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGTATTAA TCCAGACTGC AGATTATTGT CGAGTCATTT CTCCACTTAA ACGTGTTGAG 
GATATTAATT CAATCCCTTT ATTTGGCGCT TACGGTAAAG ATCTAGCAAT GGCACAAGGA
TTGGAAGTTG CTTTTAATAT GCTACTCACT CGGGTGCACC AGCTGAAAAA AAAGCAAGTG
AAAGTGAAAC GCCCCTGGTT GATTTTATTC ACAGATGGAT TGGGGAGTGA TTATGATAAG
GAAACAGCCA AAAAATTATA CCGTTACAGC TTAGAAAATA AACTAATTGT TTTTATTGTA
AATATTGGCA AAGAAACTGA CGATTTAGCT AAATTTTCAT CGATAGCCCC TTTAGTCATC
AACATCAGTA AAATTGAAAG TATCTTTACA TGGTTTTATA ACAGTTTTAC CGAAATCATA
CTTGCAGAAG ATGGAATTGT TATCCTCAAG GCACCCGAAA TATAA
 
Protein sequence
MVLIQTADYC RVISPLKRVE DINSIPLFGA YGKDLAMAQG LEVAFNMLLT RVHQLKKKQV 
KVKRPWLILF TDGLGSDYDK ETAKKLYRYS LENKLIVFIV NIGKETDDLA KFSSIAPLVI
NISKIESIFT WFYNSFTEII LAEDGIVILK APEI