| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1499 |
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| Symbol | |
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| ID | 4626555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 1845512 |
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| End bp | 1847374 |
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| Gene Length | 1863 bp |
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| Protein Length | 620 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 639796702 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_942912 |
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| Protein GI | 119945232 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0511559 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGCAT CGATAGTAAA AACCGGCCGT CAAAGACTAA CAGGTAATTC TATTATTTAC
TCTTTGATGT TCGCTACCCT GCTGTTAATT TCATCCCCAC AAGCTATCTC AATGCAGTTG
CTGCAGTCAA CATTTTTAAT CGATAGACAC GAGCAAGGCG ATATTATTGA CTTGTCCAAC
AGGCCTGATG CAAAGGCTTT TTCTGATATC AATAATTTAT TGGCGATCAA AGACTATGCA
ACGGCTATCG AAAAAGCGAA CACTGTATTA AAAAATAATC CGAATTCAGG TCTGGCAAAT
GAAGTACTTG GCACCGCCTA TTTTCTCAAC AAACAGCAGG AAAAGGCGGC CACCTCATTA
CAAAAAGCGA TCGAGCTAGA GCCCGGGCAG AGTGGAGCAC TGACTAAATT GGGCATAATC
AAGATGGAGA GTGGTGATAT TTTCGAAGCG GAAAAATTAT TGTTGAAGGC GATAGAAATT
ACTCCAGCAG ATCGGTTTGC ACATCAACGC CTTGGTTTGT TATATGAATA TCAGGCTAAG
GACCAGCGAG CGATACATCA TTTTCAACTT GGCCTCGAAG GAACCCATGA ATCTTATCTC
GGTGTTGCCG TCAATCTTGG GCGCTTATTG AATAAATCAG GCAACTTTGC TGTGACCATT
GCGGTACTTG AGCCGCGCGT CTTACTTTAC GAGACGAATA CTGATGCACA AATGGTGCTA
GCAACTGCCT ATCTGGCAAC CGGCAATTAC CTCGACGCTC GCATGCGATT TCAGCATGTA
TTGCAGTCAG GGCTGTCGAT GCCTAAGGCA TTGCTTGGGC TTGCCAAGGC ACAACGTGGC
GAAAGTGATT TTTCTGCCGC TATGAAGACG ATAAATAAAC TTGTTAAACA AAAACCAGAT
TCTGCTCTGG CGCAGATGGA AAAAGGCGAG ATTTTACTGA GGTTAGACCA AAGAAAAAAA
GCCAACAGCG CCTTCAATGA AGCCGTTGCA CTAGGCTTAA GCCGCAGTTA TGTCAATCAA
CGTATCGCCA AATTTCACCT CGATAATAAG GATTTTGCAC AGGCGCGTGA TATTTATCAG
GCGATGGTCG ATGATAAAAC TGCAGATGTG TTCACCTATG GTCAATTATC CGAATTATTG
ATGGGTGAAG GCAATATCGA AAAAGGTGAG CTTATATTGC GTAACGGCAT TGAACGTTTC
CCGAACGATG CCTATTTGCA CCTGAGGCTG GGAAGTTACC TGGCATCTAT CAGAAGTTAC
GAGGAATCAC TCCCTATACT GGAAAAAGCC ACAGAGCTTT CAGCTGATGA TATCGCTATC
TGGAAAGTAT ATGCGTTGGC ACTTGCACGC ACTGACCACA ACGAGGATGC CGTCAATGCC
GCCGCTCGAC TCTATGTATT GCAACCCAAC AGAACTGAGC CAGCCATCTT CTATGCGACT
CAGTTAGAAG CAAATAAACG TTTTGATGAG GCAGAAACTC TCTATCGAAA AATAATTCAG
GCAGTACCCA ATCATGCGCT GGCATTAAAT AATCTGGCTA ACATCCTTGC TGATAAAGGT
GATCATAACG AAGCGGAAAC GATGGCAAGA CGCGCTGTCG GTGTGGTGAG TGATAATGCC
AGCATACTGG ATACGTTAGG TTGGGTTCTC TACAAACAGG GTAACCTGAA TGAATCACTA
GAGGTGCTGG ATAATGCAAA CAAGCTTGCA CCGGAAGCTG CTGTTATATG GTATCACAAG
GGTGTGGTGC TGGATAAAAC AGGTCGACGT GCTGAAGCAA AAGTAGCTAT TGAAAAAGCC
CTTTCAATCA ATTCAAAGGC GAATTGGGCA GATGCGGCTG GCGTGCTTCT GACGCAACTA
TAA
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| Protein sequence | MIASIVKTGR QRLTGNSIIY SLMFATLLLI SSPQAISMQL LQSTFLIDRH EQGDIIDLSN
RPDAKAFSDI NNLLAIKDYA TAIEKANTVL KNNPNSGLAN EVLGTAYFLN KQQEKAATSL
QKAIELEPGQ SGALTKLGII KMESGDIFEA EKLLLKAIEI TPADRFAHQR LGLLYEYQAK
DQRAIHHFQL GLEGTHESYL GVAVNLGRLL NKSGNFAVTI AVLEPRVLLY ETNTDAQMVL
ATAYLATGNY LDARMRFQHV LQSGLSMPKA LLGLAKAQRG ESDFSAAMKT INKLVKQKPD
SALAQMEKGE ILLRLDQRKK ANSAFNEAVA LGLSRSYVNQ RIAKFHLDNK DFAQARDIYQ
AMVDDKTADV FTYGQLSELL MGEGNIEKGE LILRNGIERF PNDAYLHLRL GSYLASIRSY
EESLPILEKA TELSADDIAI WKVYALALAR TDHNEDAVNA AARLYVLQPN RTEPAIFYAT
QLEANKRFDE AETLYRKIIQ AVPNHALALN NLANILADKG DHNEAETMAR RAVGVVSDNA
SILDTLGWVL YKQGNLNESL EVLDNANKLA PEAAVIWYHK GVVLDKTGRR AEAKVAIEKA
LSINSKANWA DAAGVLLTQL
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