Gene Ping_1416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1416 
Symbol 
ID4626968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1737267 
End bp1738445 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content44% 
IMG OID639796622 
Productornithine decarboxylase 
Protein accessionYP_942832 
Protein GI119945152 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0019] Diaminopimelate decarboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACGC AACCACTAAA ATATTATTCA CAGTCTACTT TTGAGCGTAT TTGTGCGAAG 
GCAAAAGAGG TTGAAACCCC CTTTGTCATC ATAGACAGTG CCACTGTTGA AGATCATTTT
GATGCATTGA GGAACAATTT TCCCTGGGCG GAAATCTATT ATGCTTTAAA GGCAAATCCT
GCTCATGAAA TTATTGATAT TGTTAATAAT AAAGAGGGGG GATTTGATCT TGCCTCTACC
TATGAGCTTG ACCGGGTAAT CTCCCATGGT ACTGATCCGG ATCTTATCAG TTATGGCAAT
ACCATCAAAA AACGGGCAGA TATTAAATAT TTTTATGATG CCGGCATAAG AATGTTTGTT
ACTGATTCAG ATGCTGATCT GGCCAATATT GCCGCCATGG CGCCCGGTGC TAAAGTTTAC
GTCCGTATTC TTACGGAAGG CAACTTGACC GCTGACTGGC CGCTGTCGCG TAAATTTGGC
TGCCAGCCTG ATATGGCAAT GGATCTTCTG GTCAAAGCTC AAAAACTGGG TTTAGAACCT
TATGGTGTTT CATTTCATGT CGGCTCGCAA CAACGTGATA TTGGTGCCTG GGATGGGGCG
ATTGCGACGG TGAAAGTTAT TTTTGAACGT CTTAAATCAG AAAATAATAT TGAATTACAG
ATGATTAATA TGGGGGGAGG TTTTCCTGCT CAGTATATTC ATCAGACTAA TACTTTAGCA
GTCTATGCGG CAGAAATTCA GCGTTTTCTG ATTGAGGATT TCGGTGCAAC ACTGCCGCGC
ATTATTCTTG AGCCGGGCCG TTCCTTAGTC GCTAATGCGG GGATCCTGGT GACTGAAGTG
GTGCAGGTTT CACGTAAGAG TAATACTGCG CTACATCGCT GGGTATATAC CGATGTTGGG
CTGTTTTCTG GAATGATAGA AACCCTTGGG GAGGCGATTA AATATCCGTT ATATTGCGAA
ACCTCCTCGC CAGGCACGGG GGAGGAATCT GAAGAAGTGG TCATCGCAGG GCCTACCTGT
GATAGCGCTG ATATTTTGTA TGAGGATTAT AAATACCGAC TACCGCATAG CTTGAAAGAA
GGAGACCGGC TTTTTTGGTT TTCAACGGGG GCTTATACCA CCTCTTATAG TGCGGTTGAA
TTTAACGGAT TCCCGCCATT AAAATCCTAT TTTGTATAA
 
Protein sequence
MLTQPLKYYS QSTFERICAK AKEVETPFVI IDSATVEDHF DALRNNFPWA EIYYALKANP 
AHEIIDIVNN KEGGFDLAST YELDRVISHG TDPDLISYGN TIKKRADIKY FYDAGIRMFV
TDSDADLANI AAMAPGAKVY VRILTEGNLT ADWPLSRKFG CQPDMAMDLL VKAQKLGLEP
YGVSFHVGSQ QRDIGAWDGA IATVKVIFER LKSENNIELQ MINMGGGFPA QYIHQTNTLA
VYAAEIQRFL IEDFGATLPR IILEPGRSLV ANAGILVTEV VQVSRKSNTA LHRWVYTDVG
LFSGMIETLG EAIKYPLYCE TSSPGTGEES EEVVIAGPTC DSADILYEDY KYRLPHSLKE
GDRLFWFSTG AYTTSYSAVE FNGFPPLKSY FV