Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_1416 |
Symbol | |
ID | 4626968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 1737267 |
End bp | 1738445 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 639796622 |
Product | ornithine decarboxylase |
Protein accession | YP_942832 |
Protein GI | 119945152 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGACGC AACCACTAAA ATATTATTCA CAGTCTACTT TTGAGCGTAT TTGTGCGAAG GCAAAAGAGG TTGAAACCCC CTTTGTCATC ATAGACAGTG CCACTGTTGA AGATCATTTT GATGCATTGA GGAACAATTT TCCCTGGGCG GAAATCTATT ATGCTTTAAA GGCAAATCCT GCTCATGAAA TTATTGATAT TGTTAATAAT AAAGAGGGGG GATTTGATCT TGCCTCTACC TATGAGCTTG ACCGGGTAAT CTCCCATGGT ACTGATCCGG ATCTTATCAG TTATGGCAAT ACCATCAAAA AACGGGCAGA TATTAAATAT TTTTATGATG CCGGCATAAG AATGTTTGTT ACTGATTCAG ATGCTGATCT GGCCAATATT GCCGCCATGG CGCCCGGTGC TAAAGTTTAC GTCCGTATTC TTACGGAAGG CAACTTGACC GCTGACTGGC CGCTGTCGCG TAAATTTGGC TGCCAGCCTG ATATGGCAAT GGATCTTCTG GTCAAAGCTC AAAAACTGGG TTTAGAACCT TATGGTGTTT CATTTCATGT CGGCTCGCAA CAACGTGATA TTGGTGCCTG GGATGGGGCG ATTGCGACGG TGAAAGTTAT TTTTGAACGT CTTAAATCAG AAAATAATAT TGAATTACAG ATGATTAATA TGGGGGGAGG TTTTCCTGCT CAGTATATTC ATCAGACTAA TACTTTAGCA GTCTATGCGG CAGAAATTCA GCGTTTTCTG ATTGAGGATT TCGGTGCAAC ACTGCCGCGC ATTATTCTTG AGCCGGGCCG TTCCTTAGTC GCTAATGCGG GGATCCTGGT GACTGAAGTG GTGCAGGTTT CACGTAAGAG TAATACTGCG CTACATCGCT GGGTATATAC CGATGTTGGG CTGTTTTCTG GAATGATAGA AACCCTTGGG GAGGCGATTA AATATCCGTT ATATTGCGAA ACCTCCTCGC CAGGCACGGG GGAGGAATCT GAAGAAGTGG TCATCGCAGG GCCTACCTGT GATAGCGCTG ATATTTTGTA TGAGGATTAT AAATACCGAC TACCGCATAG CTTGAAAGAA GGAGACCGGC TTTTTTGGTT TTCAACGGGG GCTTATACCA CCTCTTATAG TGCGGTTGAA TTTAACGGAT TCCCGCCATT AAAATCCTAT TTTGTATAA
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Protein sequence | MLTQPLKYYS QSTFERICAK AKEVETPFVI IDSATVEDHF DALRNNFPWA EIYYALKANP AHEIIDIVNN KEGGFDLAST YELDRVISHG TDPDLISYGN TIKKRADIKY FYDAGIRMFV TDSDADLANI AAMAPGAKVY VRILTEGNLT ADWPLSRKFG CQPDMAMDLL VKAQKLGLEP YGVSFHVGSQ QRDIGAWDGA IATVKVIFER LKSENNIELQ MINMGGGFPA QYIHQTNTLA VYAAEIQRFL IEDFGATLPR IILEPGRSLV ANAGILVTEV VQVSRKSNTA LHRWVYTDVG LFSGMIETLG EAIKYPLYCE TSSPGTGEES EEVVIAGPTC DSADILYEDY KYRLPHSLKE GDRLFWFSTG AYTTSYSAVE FNGFPPLKSY FV
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