Gene Ping_1284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1284 
Symbol 
ID4626762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1590071 
End bp1590610 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content33% 
IMG OID639796494 
Producthemerythrin HHE cation binding domain-containing protein 
Protein accessionYP_942710 
Protein GI119945030 
COG category[S] Function unknown 
COG ID[COG3945] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0263304 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTCTA CTATCCATAA AGATCATATT AATATTAGCA ACCTGTTAAG ATTGTTAAGG 
GAAAAAGTTA AACTTTTAGA AAATGATCAA GGGGTAGATT ATCGCTTAAT GAAAGCGGTA
ATTACATATT TAAGAAATTA TTCTGATAAA TACCATCACC CGATGGAAGA TATGATCTAT
GAATATTATT TGAAATATCG CATTGTTTCC GATGAAGTTG CCAATCGTTT ATCTCTAGAG
CATCAATTGG TAAAAGAAAT TACTATCGAA CTGGATGAAT TGTTAGATAT GATTTTACTT
GATGCCGTTG TGCCCAAAGA ACAGTGCATT GAAAAGTTAA ACAACTTTAT AAAATTACAG
ATGGCGCATA TGGCCTATGA AGAACAAGAA ATATTGCCTA AGATTGAAGC AAGTTTAACA
GAAAAAGACT GGCAGATTCT TGAACAACAG TGGCAGCATC AGGGCCACAT TGATCCGTTA
TTTGGTGATA AAGTTGCTGA TGAGTATAAA AAATTATCTG AGCGTATTAA GCAAGGTTAA
 
Protein sequence
MLSTIHKDHI NISNLLRLLR EKVKLLENDQ GVDYRLMKAV ITYLRNYSDK YHHPMEDMIY 
EYYLKYRIVS DEVANRLSLE HQLVKEITIE LDELLDMILL DAVVPKEQCI EKLNNFIKLQ
MAHMAYEEQE ILPKIEASLT EKDWQILEQQ WQHQGHIDPL FGDKVADEYK KLSERIKQG