Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_1271 |
Symbol | |
ID | 4624762 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 1578343 |
End bp | 1578951 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 639796483 |
Product | HAD family hydrolase |
Protein accession | YP_942699 |
Protein GI | 119945019 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0560] Phosphoserine phosphatase |
TIGRFAM ID | [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like [TIGR01490] HAD-superfamily subfamily IB hydrolase, TIGR01490 |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATAG CACTGTTTGA TTTTGACGAA ACATTAATTG AAGAAAATTC ATTAAATTTC TTATTTAAAT ATTTTTTAGG TAATACACCA TTAGCTATAC AATTATTACC CTTGTTGTTT AAAGCTTCCA CTTATCAGCA GGGGATTAAG GTATCAATAA AAACGTATTT ATACAAAAAA TCGTTAAAAG GAAAAACACG GGAGGAGCTT TTTACGGCTG GTGTAGCGTT ATTTGATAAA GTCACTCCAA TTATTGAAGT GGTTGATCTT ATGATAAAAT TAGATGATGC CGGCATTGAA ATATGGATTG TGACTGCATC ACCAGAGTCT TATATAGCCG GTATTGTGCA GCAGCTAGGC TGGCCCGTTA AACGAGTGAT CGGTACTACT ATAATAGAGC AGAATGGCAT ACTAACGGGT GAAATTGAAA GTGAATGCCA AGAGCAAGAA AAAGTTGTTC GATTAAACAG CATTTTTAGG GGCAATGACG AGCGTTACGA CATTGTTCAG GCATTTGGTA ATTTACCGGT CGATATTCCC ATGTTAAAAA TGGCTAATAA TAGCTTTTAC GTGTTAAACG AGGTTGTGAA ACCATTTAAT GTGGAGTAG
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Protein sequence | MKIALFDFDE TLIEENSLNF LFKYFLGNTP LAIQLLPLLF KASTYQQGIK VSIKTYLYKK SLKGKTREEL FTAGVALFDK VTPIIEVVDL MIKLDDAGIE IWIVTASPES YIAGIVQQLG WPVKRVIGTT IIEQNGILTG EIESECQEQE KVVRLNSIFR GNDERYDIVQ AFGNLPVDIP MLKMANNSFY VLNEVVKPFN VE
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