Gene Ping_1271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1271 
Symbol 
ID4624762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1578343 
End bp1578951 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content35% 
IMG OID639796483 
ProductHAD family hydrolase 
Protein accessionYP_942699 
Protein GI119945019 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0560] Phosphoserine phosphatase 
TIGRFAM ID[TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like
[TIGR01490] HAD-superfamily subfamily IB hydrolase, TIGR01490 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAG CACTGTTTGA TTTTGACGAA ACATTAATTG AAGAAAATTC ATTAAATTTC 
TTATTTAAAT ATTTTTTAGG TAATACACCA TTAGCTATAC AATTATTACC CTTGTTGTTT
AAAGCTTCCA CTTATCAGCA GGGGATTAAG GTATCAATAA AAACGTATTT ATACAAAAAA
TCGTTAAAAG GAAAAACACG GGAGGAGCTT TTTACGGCTG GTGTAGCGTT ATTTGATAAA
GTCACTCCAA TTATTGAAGT GGTTGATCTT ATGATAAAAT TAGATGATGC CGGCATTGAA
ATATGGATTG TGACTGCATC ACCAGAGTCT TATATAGCCG GTATTGTGCA GCAGCTAGGC
TGGCCCGTTA AACGAGTGAT CGGTACTACT ATAATAGAGC AGAATGGCAT ACTAACGGGT
GAAATTGAAA GTGAATGCCA AGAGCAAGAA AAAGTTGTTC GATTAAACAG CATTTTTAGG
GGCAATGACG AGCGTTACGA CATTGTTCAG GCATTTGGTA ATTTACCGGT CGATATTCCC
ATGTTAAAAA TGGCTAATAA TAGCTTTTAC GTGTTAAACG AGGTTGTGAA ACCATTTAAT
GTGGAGTAG
 
Protein sequence
MKIALFDFDE TLIEENSLNF LFKYFLGNTP LAIQLLPLLF KASTYQQGIK VSIKTYLYKK 
SLKGKTREEL FTAGVALFDK VTPIIEVVDL MIKLDDAGIE IWIVTASPES YIAGIVQQLG
WPVKRVIGTT IIEQNGILTG EIESECQEQE KVVRLNSIFR GNDERYDIVQ AFGNLPVDIP
MLKMANNSFY VLNEVVKPFN VE