Gene Ping_1246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1246 
Symbol 
ID4625003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1556225 
End bp1556758 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content43% 
IMG OID639796459 
Productheat shock protein, HSP20 family protein 
Protein accessionYP_942675 
Protein GI119944995 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.143675 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0444206 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAA AAACAGATGA TTCAAAAAAC AGTGAAAGTA ACGACTTAGG TGGTGTCTTT 
CAGGGTTTAG CCAAACTGGT TGAGACGCTC GGTGATCTCG CTGACAAAGG AGCGGAGCTC
AAACGTAGTG GTGAATTCAA AATATCAGGT CAGGAAGATA ATAAAGATTT GAAAGGCGTC
TATGGTTTTT CAATAAAGAC GGGGATCAAC GAGAAGGGGG ATCAGGATAT CAATGTACAA
CCCTTCGGCA ACGTACATCG AAATGAGGAA ACGGGAGAAT CTGTTATTAT GGAGGTCAGA
GAACCTCTGG TGGATATTTT TGATGAAGAT GAATATGTAT TGGTCGTCGC GGAGATGCCT
GGAATTAGCG CAGAGGATTT ACGGCTGGAG CTGCACGACG ACATTTTGGA TTTGACGGCA
GAGAAAGGAA ATAACAAATA CCACAAAGAG CTGCTGCTGC CAGCGACATT CACCACCGAG
CAAATGGATA TTTCGGTGAA GAATGGAATG GTTGAAATTA AACTGCGTAA ATAA
 
Protein sequence
MKKKTDDSKN SESNDLGGVF QGLAKLVETL GDLADKGAEL KRSGEFKISG QEDNKDLKGV 
YGFSIKTGIN EKGDQDINVQ PFGNVHRNEE TGESVIMEVR EPLVDIFDED EYVLVVAEMP
GISAEDLRLE LHDDILDLTA EKGNNKYHKE LLLPATFTTE QMDISVKNGM VEIKLRK