Gene Ping_1227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1227 
Symbol 
ID4624494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1528348 
End bp1528875 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content41% 
IMG OID639796440 
Productcytochrome B561 
Protein accessionYP_942656 
Protein GI119944976 
COG category[C] Energy production and conversion 
COG ID[COG3658] Cytochrome b 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.168026 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAC AATCAATGAT TTGGGATCCA CTCGTTCGTT TTTTTCATTG GACAGTGGCA 
GCCTCGTTTC TGCTCAACTT CCTGATTTTT GAAGAAGGTG AAACAAACCA TCGCTGGGCT
GGTTATTATA TTTTAGCCGC CTTGGCAATT CGTATACTAT GGGGGTTTAT TGGCTCTAAA
AATGCGCGTT TTAAAGACTT TTTACCAACG TCTAGTGGCA TTAAGCAGCA TTTAAATTTA
CTTATATCAG GACGGTTCGA AGTCTCAGAG GGTCATACTC CTCTTGGTGG CTTAATGGTC
TTCGCATTAT TATTTTGCCT GTTAAGCACC GGTCTCTCCG GTTGGATGAC GGAGTTAGAT
GTATTCTGGG TAGGTGATTG GCTTGAGGAG ATACATGAGT TCTTAGCAAG CACAACCATG
ACCTTAGTGG TTATTCATGT GTCGGCAGTT TTCTTGTTAA GCAAATTTGG TCCTGTAAAT
TTAATTAAGC AAATGATCAC CGGACAACGG GACAACTGTT CTAAATAG
 
Protein sequence
MKAQSMIWDP LVRFFHWTVA ASFLLNFLIF EEGETNHRWA GYYILAALAI RILWGFIGSK 
NARFKDFLPT SSGIKQHLNL LISGRFEVSE GHTPLGGLMV FALLFCLLST GLSGWMTELD
VFWVGDWLEE IHEFLASTTM TLVVIHVSAV FLLSKFGPVN LIKQMITGQR DNCSK