| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_1217 |
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| Symbol | |
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| ID | 4623768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 1519587 |
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| End bp | 1521353 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 639796432 |
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| Product | hydrogenase, NADP-reducing subunit C |
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| Protein accession | YP_942648 |
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| Protein GI | 119944968 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit
[COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.180172 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAAG CTCTTGCCAC ACTGATTCAG GCACAAGTTA AAGTCTATCG GGGCGACCCT
ACTTATATAT TACAAATACT GCGGCATATT CAATTTTCCT GCTCACATAT TCCCCAGCAG
GCGATCCAGC AACTTGCCAC TACATTGAGC ATATCAATCC CTAAAATCAG GGCGCTTATC
GAGTTTTATC ACTTTCTCCA TTATCACCCT CGAGGCGATT ATGATATCTA CATCAGCGAT
AGCATCATCG ACCATATGTC GGGTAAAAAT GAAATCAGCA ACTATCTCTG TGAAAAACTC
AATGTTAAAT TAAATCAGCC CAGAGCGGAC GGACGGGTAA CTGTCTCTAA CACTTCCTGT
ACAGGCATGA GTGATCAGGG ACCTGCTGCA TTGATTAATG GTCTAGCATT GACCCGCCTG
ACCCGGAAAA AAGTCGATCA GATTGTTACG AAAATTGAAG GAAAGATTGC CATTGATAGG
TGGCCAAAGG CATGGTTTGA GGTAACTGAT AATATCCAAA GTAAAGGCGT GTTATTAAAT
TCGGAAAGCA GACCCGGGGA GGCGATTAAA AAAGCACTGG CAACAGCGCC TCACGACAGC
CTTGCCGAAA TTGACAAGTC CGGGCTGCGC GGCTGCGGTG GTGCCGGTTT TAAAACTGCT
GAAAAATGGA AGTCCTGTCT GTTAAGCGAC GATAATCAAC GTTATGTGGT ATGTAATGCC
GATGAAGGTG AACCCGGTAC TTTTAAAGAT CGCGTTTTAC TGAACAGTTA TGCCGATCTG
TTAATTGAAG GAATGACCCT TTGTGCCTAT GTTATTGGCG CTCAAAAAGG GTTTATTTAT
CTGCGTTATG AATATCAGCA CCTCTATAAA AAGCTTCTGG AAACATTACA GAGACGCCGC
GCTGCCAACC TATTAGGCGC GCATATTTTA AACAGTGAGC TGAGTTTTGA TATTGAAATA
TTTATGGGTG CCGGCTCCTA TGTCTGCGGT GAAGAATCGG CTTTGCTCGA ATCCCTTGAA
GGCCGTCGTG CCATTCCACG CATCCGCCCC CCTTTTCCCG TGACGCATGG TTACTTAGAT
AAACCAACAG TGGTCAACAA TGTAGAAACC TTTTGTTATG CCGCGCTTAT TATAGAAAAA
GGCGCTGAAA ATTTTTCTGC TCAAGGGCTT GCCGGCTTTA CTGGTTGTAA AATTTTAAGC
ATCAGCGGCG ACGTGGAAAA AACGGGGATT TACGAGATCC CCTTGGGACT GCCAGTGAAA
AATGTGCTCA ATTTATGCGG CGCACAATCT GTTCAAGCGG TGCAGGTTGG CGGCCCTTCC
GGTACTTTGA TTACCCCAGC TGAATTTAGC CGCGTAATTT CATTTGATGA TCTCCATACC
GGCGGCTCTT TTATGGTGTT TAACCAAAGC CGCGATATCC TTGAAAATGC GCTTAACTTT
ACCCATTTTT TTATGCAGGA AAGCTGCGGC TTCTGTACGC CCTGCCGCGT AGGCACTAAG
CTAATCTATG ATTTGGCCGA TAAAGTTGCC ACCGGGCAAG GCGCCAGACT GGATCTGGAC
AGCATCAAGC AGCTTAACCA TGTGATGAAT GGAATGAGCC ATTGCGGATT AGGACAAAGA
GCGGCAGAGC CCCTATTAGA AACATTAGAA AAATTTCCCG AGTATTTTGT TAAACGCATG
ACAGATATTG AGTATCAGCC TTCCTTTGAT GTGGAAAAAT CAATTCAGCG GGCGATTGAT
ATCGTCACCA TAGAGAGTAA TTCATAG
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| Protein sequence | MNKALATLIQ AQVKVYRGDP TYILQILRHI QFSCSHIPQQ AIQQLATTLS ISIPKIRALI
EFYHFLHYHP RGDYDIYISD SIIDHMSGKN EISNYLCEKL NVKLNQPRAD GRVTVSNTSC
TGMSDQGPAA LINGLALTRL TRKKVDQIVT KIEGKIAIDR WPKAWFEVTD NIQSKGVLLN
SESRPGEAIK KALATAPHDS LAEIDKSGLR GCGGAGFKTA EKWKSCLLSD DNQRYVVCNA
DEGEPGTFKD RVLLNSYADL LIEGMTLCAY VIGAQKGFIY LRYEYQHLYK KLLETLQRRR
AANLLGAHIL NSELSFDIEI FMGAGSYVCG EESALLESLE GRRAIPRIRP PFPVTHGYLD
KPTVVNNVET FCYAALIIEK GAENFSAQGL AGFTGCKILS ISGDVEKTGI YEIPLGLPVK
NVLNLCGAQS VQAVQVGGPS GTLITPAEFS RVISFDDLHT GGSFMVFNQS RDILENALNF
THFFMQESCG FCTPCRVGTK LIYDLADKVA TGQGARLDLD SIKQLNHVMN GMSHCGLGQR
AAEPLLETLE KFPEYFVKRM TDIEYQPSFD VEKSIQRAID IVTIESNS
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