Gene Ping_1180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_1180 
Symbol 
ID4624479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp1471707 
End bp1472795 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content31% 
IMG OID639796393 
Producthypothetical protein 
Protein accessionYP_942614 
Protein GI119944934 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0744588 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTAG ATAGATTCTC TTCTGAGAGA TTAGATATTA TTAGATTCCC ACTTATTGTA 
GGAGTCATAT TTATTCATGC AATTGGGTCA AGCGTAAAGC TAAAAAACAG TAATACCGGT
ATTGAGCAAA TAGGTTTCAT TTCTGAATTC ATACAAGCTT TTATTTCTAA TGGATTAGCA
AGAATTGCTG TACCGCTTTT CTTCTTAATT TCAGGATATC TATTTTTCTT AGCATTTACA
TGGTCTTTAG AAAAATATCA ATCAAAAGTA AAAAGTAGAT TAAGGACTCT TGTTATTCCT
TTTCTATTTT GGAATGCTAT CTGCATATTG GTATTTTTTA TAGCACAATC GATACCATCA
ACAAGTGTGT TTTTCTCGGG ATCTAATCAA TATATAGCTA CATATAATGT TTTTGACTTT
TTTAATAATT TACTTGGGTT GAATAAATCG CCAATATCTT ATCAGTTTTG GTTCATAAGG
GATTTAATAG TAATGGTTAT TCTAGCTCCA TTATTTTTAC TCATCCTTAA TAATAAAAAC
ATATCAACTT TTGTTTTTGC ATGTTTATTT ACCCTGTGGT TTATAGGTTT TTGGCCTATA
TATGTCCCGT CTTTAGCTGC TTTTTTCTTC TTCTATGCAG GTGCATACTT CAGTAATATG
AAATTTGATT TATTTTCAAT AGATCGATAT GGGAAGGTGA TATCTTCTAT TTATCTGATT
ATTTTGGTGA CAGATTCTTT AACAAAAGGG GAAGTTTACA GCAGTTATAT CCATAAAATT
GGTATAGTAT TTGGTATAAT GACAGCTCTT TATCTTTCAA AATATGCCTT GCAGAGTACT
GTTGCAAAGA ATGTTCTGTT AAAATTGTCA CATTATAGTT TCTTTGTGTT TGCCGTACAT
GAACCAATAC TTACAATACT TAAAAAGATT ATATATAAAC TAATTGTTCC AACATCTGAC
TTGGCAGTTA CATCTATCTA CCTTTCAATC CCAATTGCAG TTATACTCAT TTCCCTAGCT
GCATACAAAG TACTGAGCAT GGCAATTCCA AAAACACTAA ACATAGTGAC AGGTGGAAGG
AAAACATAA
 
Protein sequence
MKLDRFSSER LDIIRFPLIV GVIFIHAIGS SVKLKNSNTG IEQIGFISEF IQAFISNGLA 
RIAVPLFFLI SGYLFFLAFT WSLEKYQSKV KSRLRTLVIP FLFWNAICIL VFFIAQSIPS
TSVFFSGSNQ YIATYNVFDF FNNLLGLNKS PISYQFWFIR DLIVMVILAP LFLLILNNKN
ISTFVFACLF TLWFIGFWPI YVPSLAAFFF FYAGAYFSNM KFDLFSIDRY GKVISSIYLI
ILVTDSLTKG EVYSSYIHKI GIVFGIMTAL YLSKYALQST VAKNVLLKLS HYSFFVFAVH
EPILTILKKI IYKLIVPTSD LAVTSIYLSI PIAVILISLA AYKVLSMAIP KTLNIVTGGR
KT